RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ZNF593O00488 134 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 TBX1O43435 398 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L2P0CJ85 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L3P0CJ86 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L4P0CJ87 422 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L5P0CJ88 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L6P0CJ89 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L7P0CJ90 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 CLUP10909 449 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 SPI1P17947 270 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 MZT1Q08AG7 82 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 PPP1R8Q12972 351 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4L9Q6RFH8 374 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 C11orf53Q8IXP5 236 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 FGFRL1Q8N441 504 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 LINC00471Q8N535 108 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 OR4Q3Q8NH05 313 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 SSMEM1Q8WWF3 244 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 ST8SIA4Q92187 359 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 CITED1Q99966 193 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 TSSK6Q9BXA6 273 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 NMNAT2Q9BZQ4 307 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 KAAG1Q9UBP8 84 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 DUX4Q9UBX2 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 PRKDCP78527 4128 aaKnown RBP17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 A0A0U1RQK1 487 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 DHRS12A0PJE2 317 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 CLPSL1A2RUU4 121 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 ANKRD30BLA7E2S9 258 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 CCNB2O95067 398 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 CX3CR1P49238 355 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 ELF3P78545 371 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 FAM3AP98173 230 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 MIDNQ504T8 468 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 TEX30Q5JUR7 227 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 BRICD5Q6PL45 260 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 CYP2R1Q6VVX0 501 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 SLC16A9Q7RTY1 509 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 PDZD9Q8IXQ8 264 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 DEFB107AQ8IZN7 70 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 OR6K6Q8NGW6 343 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 OR8S1Q8NH09 359 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 ARL8BQ9NVJ2 186 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
TRAPPC3-208ENST00000616074 SOX14O95416 240 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 ECDO95905 644 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 IGHV4-59P01825 116 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 ANXA2P07355 339 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 ATP6V1B2P21281 511 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 DDOSTP39656 456 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 MAGEA2P43356 314 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 SLC25A1P53007 311 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 KRTAP10-3P60369 221 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 GRB2P62993 217 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 AQP11Q8NBQ7 271 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 SCCPDHQ8NBX0 429 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 TBC1D15Q8TC07 691 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 LRRC29Q8WV35 223 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 DYRK2Q92630 601 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 PPP1R3EQ9H7J1 279 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 ARMC1Q9NVT9 282 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 RPUSD1Q9UJJ7 312 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 WNK1Q9H4A3 2382 aa17.14■□□□□ 0.33
TRAPPC3-208ENST00000616074 GPR137BO60478 399 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 RPL15P61313 204 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 CSNK2BP67870 215 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 EIF2B1Q14232 305 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 OCLNQ16625 522 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 TIGD6Q17RP2 521 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 C11orf91Q3C1V1 193 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 LINC01590Q5TEZ4 76 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 C16orf89Q6UX73 402 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 DPY19L4Q7Z388 723 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 VMO1Q7Z5L0 202 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 LDLRAD3Q86YD5 345 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 OR2T33Q8NG76 320 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 OR1M1Q8NGA1 313 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 SGK3Q96BR1 496 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 REEP6Q96HR9 211 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 CCL13Q99616 98 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 CNTD2Q9H8S5 307 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 RNPEPL1Q9HAU8 725 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 BAIAP2Q9UQB8 552 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 NOTCH1P46531 2555 aa17.13■□□□□ 0.33
TRAPPC3-208ENST00000616074 hCG_38984A0A1B0GV85 526 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 MUC1P15941 1255 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 HSD11B1P28845 292 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 GRK5P34947 590 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 SLC15A1P46059 708 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 IER3P46695 156 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 MICBQ29980 383 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 CDONQ4KMG0 1287 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 KLHL12Q53G59 568 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 WDR38Q5JTN6 314 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 WDR82Q6UXN9 313 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 RHOUQ7L0Q8 258 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 PRSS45Q7RTY3 260 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 CPLX4Q7Z7G2 160 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 241.8 ms