RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PLPP3O14495 311 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 GPR171O14626 319 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 PLA2G10O15496 165 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 WIPF1O43516 503 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 OR2T1O43869 369 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 SLC16A7O60669 478 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CTAG2O75638 210 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 PMS2P2O95744 297 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 HOXD4P09016 255 aaPredicted RBP4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CSF3P09919 207 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CLUP10909 449 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 SLC2A1P11166 492 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 RORCP51449 518 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CDH11P55287 796 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 ATP5J2P56134 94 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 TRAM2Q15035 370 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 SPHARQ15513 63 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 ODF4Q2M2E3 257 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 HFEQ30201 348 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 TMPRSS11AQ6ZMR5 421 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 ZNF704Q6ZNC4 412 aaPredicted RBP4.3□□□□□ -1.72
SYCP1-209ENST00000613524 GDPGP1Q6ZNW5 385 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 MDP1Q86V88 176 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 PHC2Q8IXK0 858 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 WFDC11Q8NEX6 87 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 FANK1Q8TC84 345 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 SLC25A46Q96AG3 418 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CEP19Q96LK0 163 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 PRRC1Q96M27 445 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 FYTTD1Q96QD9 318 aaKnown RBP4.3□□□□□ -1.72
SYCP1-209ENST00000613524 TSPAN32Q96QS1 320 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 NMNAT3Q96T66 252 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CCL19Q99731 98 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 PRSS27Q9BQR3 290 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 TMEM246Q9BRR3 403 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
SYCP1-209ENST00000613524 EXOSC3Q9NQT5 275 aaKnown RBP4.3□□□□□ -1.72
SYCP1-209ENST00000613524 MRPL15Q9P015 296 aaKnown RBP4.3□□□□□ -1.72
SYCP1-209ENST00000613524 B3GAT1Q9P2W7 334 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 STUB1Q9UNE7 303 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 CMAHPQ9Y471 501 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 ZNF175Q9Y473 711 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 MXRA5Q9NR99 2828 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 AKAP9Q99996 3911 aa4.3□□□□□ -1.72
SYCP1-209ENST00000613524 A0A0G2JMP0 313 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 DPRXA6NFQ7 191 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 SH2D7A6NKC9 451 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 CENPXA8MT69 81 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 RGS5O15539 181 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 SS18L1O75177 396 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 BGLAPP02818 100 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 SOD3P08294 240 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 MRPL3P09001 348 aaKnown RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 VSIG8P0DPA2 414 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 LAP3P28838 519 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 MFAP4P55083 255 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 EFNB1P98172 346 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 TGFBR3Q03167 851 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 HSF2Q03933 536 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ZNF91Q05481 1191 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 MEDAGQ5VYS4 303 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 LEG1Q6P5S2 330 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 TMEM81Q6P7N7 255 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 Q6ZT83 130 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 SLC16A14Q7RTX9 510 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 OR5AS1Q8N127 324 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 GABRG1Q8N1C3 465 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 OR52E2Q8NGJ4 325 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 C2CD4CQ8TF44 421 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 RNF138Q8WVD3 245 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 RASSF5Q8WWW0 418 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 TMEM80Q96HE8 168 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 SPATA25Q9BR10 227 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 NOX3Q9HBY0 568 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ABCB9Q9NP78 766 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 NRIP3Q9NQ35 241 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 CENPMQ9NSP4 180 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 DDX28Q9NUL7 540 aaKnown RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 PAQR5Q9NXK6 330 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 TAS2R5Q9NYW4 299 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 NUFIP1Q9UHK0 495 aaKnown RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ARFGEF3Q5TH69 2177 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 NSD1Q96L73 2696 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 TRAF3IP2O43734 574 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 GPRIN2O60269 458 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 CGAP01215 116 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 SELEP16581 610 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 OR3A2P47893 321 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 MLLT11Q13015 90 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 CCDC58Q4VC31 144 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ARMC4Q5T2S8 1044 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ZNF613Q6PF04 617 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ADGRE4PQ86SQ3 457 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 NOXA1Q86UR1 476 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 BATF2Q8N1L9 274 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 ZNF433Q8N7K0 673 aaPredicted RBP4.29□□□□□ -1.72
SYCP1-209ENST00000613524 POMGNT2Q8NAT1 580 aa4.29□□□□□ -1.72
SYCP1-209ENST00000613524 PROKR2Q8NFJ6 384 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms