RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 SOX8P57073 446 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 SSTP61278 116 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 CD276Q5ZPR3 534 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 ZNF439Q8NDP4 499 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 LRP12Q9Y561 859 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 A0A1B0GTQ1 180 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 TCTN1Q2MV58 587 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 FAHD1Q6P587 224 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 WDR74Q6RFH5 385 aaPredicted RBP18.12■□□□□ 0.49
CTDP1-208ENST00000613122 ABI3BPQ7Z7G0 1075 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 OTOSQ8NHW6 89 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 YIPF5Q969M3 257 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 CIB3Q96Q77 187 aaPredicted RBP18.12■□□□□ 0.49
CTDP1-208ENST00000613122 NDFIP1Q9BT67 221 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 SSSCA1O60232 199 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 GABRA1P14867 456 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 DTYMKP23919 212 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 PXT1Q8NFP0 134 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 SLC7A6Q92536 515 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 RNF167Q9H6Y7 350 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 OSGIN2Q9Y236 505 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 DBX2Q6ZNG2 339 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 SFTPA1Q8IWL2 248 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 ISG20L2Q9H9L3 353 aaKnown RBP18.12■□□□□ 0.49
CTDP1-208ENST00000613122 TCFL5Q9UL49 500 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 FZR1Q9UM11 496 aa18.12■□□□□ 0.49
CTDP1-208ENST00000613122 STRAPQ9Y3F4 350 aaKnown RBP18.12■□□□□ 0.49
CTDP1-208ENST00000613122 NUPL2O15504 423 aaKnown RBP18.11■□□□□ 0.49
CTDP1-208ENST00000613122 TBX19O60806 448 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 C20orf202A1L168 122 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 CYC1P08574 325 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 BTG1P62324 171 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 C17orf107Q6ZR85 190 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 OR10AD1Q8NGE0 317 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 DRAM2Q6UX65 266 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 OR4C3Q8NH37 302 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 FGF20Q9NP95 211 aaPredicted RBP18.11■□□□□ 0.49
CTDP1-208ENST00000613122 CDK5RAP2Q96SN8 1893 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 PPP1CAP62136 330 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 OR2T2Q6IF00 324 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 OR2Y1Q8NGV0 311 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 OR13G1Q8NGZ3 307 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 DUS3LQ96G46 650 aaKnown RBP18.11■□□□□ 0.49
CTDP1-208ENST00000613122 M6PRP20645 277 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 TMEM182Q6ZP80 229 aaPredicted RBP18.11■□□□□ 0.49
CTDP1-208ENST00000613122 ZNF683Q8IZ20 524 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 SLC26A1Q9H2B4 701 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 COLQQ9Y215 455 aaPredicted RBP18.11■□□□□ 0.49
CTDP1-208ENST00000613122 CSAG2Q9Y5P2 127 aa18.11■□□□□ 0.49
CTDP1-208ENST00000613122 OR5H15A6NDH6 313 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 HRH1P35367 487 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 LYSMD2Q8IV50 215 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 CD1EP15812 388 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 YBX1P67809 324 aaKnown RBP18.1■□□□□ 0.49
CTDP1-208ENST00000613122 FABP5Q01469 135 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 SPINK14Q6IE38 97 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 OR8B4Q96RC9 309 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 CDC14BO60729 498 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 LYZL6O75951 148 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 IAPPP10997 89 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 CLPPQ16740 277 aaPredicted RBP18.1■□□□□ 0.49
CTDP1-208ENST00000613122 VMA21Q3ZAQ7 101 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 OR10K2Q6IF99 312 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 MITD1Q8WV92 249 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 SOX7Q9BT81 388 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 DNAJB12Q9NXW2 375 aaKnown RBP18.1■□□□□ 0.49
CTDP1-208ENST00000613122 C21orf140B9A014 251 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 CD82P27701 267 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 TIGD3Q6B0B8 471 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 ADPRHL1Q8NDY3 354 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 RAB1BQ9H0U4 201 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 MED9Q9NWA0 146 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 FOXJ3Q9UPW0 622 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 SPAARA0A1B0GVQ0 90 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 DMRTC1Q5HYR2 192 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 ARHGEF39Q8N4T4 335 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 SPSB1Q96BD6 273 aa18.1■□□□□ 0.49
CTDP1-208ENST00000613122 PATZ1Q9HBE1 687 aaKnown RBP18.1■□□□□ 0.49
CTDP1-208ENST00000613122 TMEM179BQ7Z7N9 219 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 AMER3Q8N944 861 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 TERB2Q8NHR7 220 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 PRR7Q8TB68 274 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 DUSP15Q9H1R2 295 aaPredicted RBP18.09■□□□□ 0.49
CTDP1-208ENST00000613122 BARX1Q9HBU1 254 aaPredicted RBP18.09■□□□□ 0.49
CTDP1-208ENST00000613122 TMUB2Q71RG4 321 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 LFNGQ8NES3 379 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 H2AFB1P0C5Y9 115 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 HOXD12P35452 270 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 CCL17Q92583 94 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 CFHR5Q9BXR6 569 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 RAB5CP51148 216 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 GP2P55259 537 aaKnown RBP18.09■□□□□ 0.49
CTDP1-208ENST00000613122 PTDSS2Q9BVG9 487 aa18.09■□□□□ 0.49
CTDP1-208ENST00000613122 SMLR1H3BR10 107 aa18.08■□□□□ 0.49
CTDP1-208ENST00000613122 KLF3P57682 345 aaPredicted RBP18.08■□□□□ 0.49
CTDP1-208ENST00000613122 DDOQ99489 341 aa18.08■□□□□ 0.49
CTDP1-208ENST00000613122 ADAM19Q9H013 955 aa18.08■□□□□ 0.49
CTDP1-208ENST00000613122 ANGPTL7O43827 346 aa18.08■□□□□ 0.49
CTDP1-208ENST00000613122 TNFAIP6P98066 277 aaPredicted RBP18.08■□□□□ 0.49
CTDP1-208ENST00000613122 ZNF816Q0VGE8 651 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms