RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KIAA1324LA8MWY0 1029 aaPredicted RBP10.39□□□□□ -0.75
CBWD3-208ENST00000612050 ZNF670-ZNF695F2Z2N8 137 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 FSTL3O95633 263 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 CYB5R3P00387 301 aaPredicted RBP10.39□□□□□ -0.75
CBWD3-208ENST00000612050 MRPL3P09001 348 aaKnown RBP10.39□□□□□ -0.75
CBWD3-208ENST00000612050 SLC2A5P22732 501 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 GNB2P62879 340 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 LCN2P80188 198 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 IL5RAQ01344 420 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 BTNL3Q6UXE8 466 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 LRRN1Q6UXK5 716 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 MEPCEQ7L2J0 689 aaKnown RBP10.39□□□□□ -0.75
CBWD3-208ENST00000612050 BBS1Q8NFJ9 593 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 NANPQ8TBE9 248 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 STMN2Q93045 179 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 CIB1Q99828 191 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 MICU1Q9BPX6 476 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 PAPOLGQ9BWT3 736 aaKnown RBP10.39□□□□□ -0.75
CBWD3-208ENST00000612050 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 ZFHX3Q15911 3703 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 ZANQ9Y493 2812 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 NAV3Q8IVL0 2385 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 TRAV38-1A0A0B4J264 116 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 PPIAL4CA0A0B4J2A2 164 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 IGHV3-64DA0A0J9YX35 117 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 TMEM269A0A1B0GVZ9 245 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 A0A1B0GWJ7 208 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 TCF21O43680 179 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 PRKYO43930 277 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 MTRF1O75570 445 aaKnown RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 GRPP07492 148 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 PSKH1P11801 424 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 ALOX5APP20292 161 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 DCTDP32321 178 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 MAP2K3P46734 347 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 FAM3AP98173 230 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 ZMYND11Q15326 602 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 OR8B8Q15620 311 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 SPRNQ5BIV9 151 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 C12orf73Q69YU5 71 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 THAP5Q7Z6K1 395 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 ZNF679Q8IYX0 411 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 Q8TCH9 128 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 ZNF418Q8TF45 676 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 NEIL1Q96FI4 390 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 IL4I1Q96RQ9 567 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 MYCBPQ99417 103 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 RTL8AQ9BWD3 113 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 C7orf69Q9H7B7 122 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 METTL17Q9H7H0 456 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 MOB1AQ9H8S9 216 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 WARS2Q9UGM6 360 aaKnown RBP10.38□□□□□ -0.75
CBWD3-208ENST00000612050 GTF2A1LQ9UNN4 478 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 MPC1Q9Y5U8 109 aa10.38□□□□□ -0.75
CBWD3-208ENST00000612050 NDUFA2O43678 99 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 MITFO75030 526 aaPredicted RBP10.37□□□□□ -0.75
CBWD3-208ENST00000612050 FAM20BO75063 409 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 ATP6V1B1P15313 513 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 GSK3AP49840 483 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 MAB21L1Q13394 359 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 ARMCX4Q5H9R4 360 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 PRAMEF6Q5VXH4 476 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 DCDC5Q6ZRR9 648 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 KCTD8Q6ZWB6 473 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 SLC35F2Q8IXU6 374 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 BOLLQ8N9W6 283 aaKnown RBP10.37□□□□□ -0.75
CBWD3-208ENST00000612050 OR8J1Q8NGP2 316 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 SGK3Q96BR1 496 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 SIGLEC11Q96RL6 698 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 JMJD8Q96S16 334 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 GABARAPL3Q9BY60 117 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 C1orf123Q9NWV4 160 aa10.37□□□□□ -0.75
CBWD3-208ENST00000612050 hCG_38984A0A1B0GV85 526 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 CEACAM18A8MTB9 384 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 PHF1O43189 567 aaPredicted RBP10.36□□□□□ -0.75
CBWD3-208ENST00000612050 KRT8P05787 483 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 FPR2P25090 351 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 NPY4RP50391 375 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 CXCR4P61073 352 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 EGR3Q06889 387 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 TMED1Q13445 227 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 ZNF404Q494X3 552 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 FAM220AQ7Z4H9 259 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 TRUB1Q8WWH5 349 aaKnown RBP10.36□□□□□ -0.75
CBWD3-208ENST00000612050 OR8B4Q96RC9 309 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 AMELYQ99218 206 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 C9orf16Q9BUW7 83 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 G6PC2Q9NQR9 355 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 CLN6Q9NWW5 311 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 DCAF16Q9NXF7 216 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 HAO2Q9NYQ3 351 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 CLN8Q9UBY8 286 aa10.36□□□□□ -0.75
CBWD3-208ENST00000612050 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.36□□□□□ -0.75
CBWD3-208ENST00000612050 SONP18583 2426 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms