RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 UTP23Q9BRU9 249 aaKnown RBP11.14□□□□□ -0.63
CDH1-212ENST00000611625 SPACA1Q9HBV2 294 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 OBP2BQ9NPH6 170 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 NSG2Q9Y328 171 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 PLPP3O14495 311 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CT45A8P0DMV1 189 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CT45A9P0DMV2 189 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 GABRA1P14867 456 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 F2RL1P55085 397 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 FUT7Q11130 342 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CT45A2Q5DJT8 189 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 TMEM71Q6P5X7 295 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 TMEM182Q6ZP80 229 aaPredicted RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 RFLNBQ8N5W9 214 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 SPACA9Q96E40 222 aaPredicted RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 SARGQ9BW04 601 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 ZNF275Q9NSD4 429 aaPredicted RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 NTMQ9P121 344 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 DNAJB11Q9UBS4 358 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 NYNRINQ9P2P1 1898 aaKnown RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 NRASP01111 189 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 RPA2P15927 270 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CYB561P49447 251 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CATR1Q13166 79 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 OR5M8Q8NGP6 311 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 RTN4IP1Q8WWV3 396 aaPredicted RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 PP6455Q8WZ26 134 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 FRZBQ92765 325 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 SDSLQ96GA7 329 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 TIMM10BQ9Y5J6 103 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 IGHV3-15A0A0B4J1V0 119 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 A6NCN8 305 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 C4orf51C9J302 202 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 LRP3O75074 770 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 NXPH3O95157 252 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 GPR3P46089 330 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 RAB31Q13636 194 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 STK11Q15831 433 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 HIST2H3PS2Q5TEC6 136 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 UQCC3Q6UW78 93 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 SPRED2Q7Z698 418 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 OR52N4Q8NGI2 321 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 GPX8Q8TED1 209 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 FBXW5Q969U6 566 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 GPR137Q96N19 417 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 ELF5Q9UKW6 265 aaPredicted RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 OIP5O43482 229 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 PIAS2O75928 621 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 DFFBO76075 338 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 EPPINO95925 133 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 HPNP05981 417 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 THBS4P35443 961 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 PIGPP57054 158 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 BHLHE23Q8NDY6 225 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 ZPLD1Q8TCW7 415 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 HLA-CQ95604 372 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 ZNF768Q9H5H4 540 aaKnown RBP11.13□□□□□ -0.63
CDH1-212ENST00000611625 CNTD2Q9H8S5 307 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 CYB5R1Q9UHQ9 305 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 TP53TG5Q9Y2B4 290 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 DTX4Q9Y2E6 619 aa11.13□□□□□ -0.63
CDH1-212ENST00000611625 SPAG17Q6Q759 2223 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 RLFQ13129 1914 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 OTOFQ9HC10 1997 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 YKT6O15498 198 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 CBR1P16152 277 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 TCN2P20062 427 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 FPR2P25090 351 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 NANOS3P60323 173 aaKnown RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 B3GNTL1Q67FW5 361 aaPredicted RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 LRRTM1Q86UE6 522 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 PLEKHA3Q9HB20 300 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 YBX2Q9Y2T7 364 aaKnown RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 A0A1W2PPV4 95 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 HSD17B6O14756 317 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 ADRA2CP18825 462 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 TAGLN2P37802 199 aaKnown RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 SKP2Q13309 424 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 C16orf47Q6ZP98 133 aaPredicted RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 LHFPL2Q6ZUX7 228 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 HSD17B13Q7Z5P4 300 aaPredicted RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 OR1S2Q8NGQ3 325 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 HGDQ93099 445 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 TRAF4Q9BUZ4 470 aaPredicted RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 MPC2O95563 127 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 FOXK1P85037 733 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 GGTLC2Q14390 218 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 C19orf48Q6RUI8 117 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 WDSUB1Q8N9V3 476 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 FAM181AQ8N9Y4 354 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms