RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 RAB32Q13637 225 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 MPPED2Q15777 294 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 TMEM128Q5BJH2 165 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 NHLRC3Q5JS37 347 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 THEM4Q5T1C6 240 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 PLCXD3Q63HM9 321 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ADAM5Q6NVV9 412 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 CLEC9AQ6UXN8 241 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 CATSPERDQ86XM0 798 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SECTM1Q8WVN6 248 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 MVB12AQ96EY5 273 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 GFI1Q99684 422 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF426Q9BUY5 554 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 EXOSC3Q9NQT5 275 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SLC17A5Q9NRA2 495 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 MRPL22Q9NWU5 206 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ANAPC1Q9H1A4 1944 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 A0A1W2PPC1 479 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 PHF1O43189 567 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SGCEO43556 437 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SIGLEC6O43699 453 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 DDAH2O95865 285 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 IFNA2P01563 188 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 FCGR2CP31995 323 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SSBP1Q04837 148 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 FZD5Q13467 585 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 RGS7BPQ6MZT1 257 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 Q6ZRG5 221 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 DOK3Q7L591 496 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 HSD17B13Q7Z5P4 300 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 TMEM217Q8N7C4 229 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 GJC3Q8NFK1 279 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 IL1F10Q8WWZ1 152 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SCARF2Q96GP6 870 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SGCZQ96LD1 299 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 METTL9Q9H1A3 318 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF576Q9H609 170 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 HEXA-AS1Q9H8Q6 139 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 KCNS2Q9ULS6 477 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 FBXO7Q9Y3I1 522 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 MTCL1Q9Y4B5 1905 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 IGHV1OR21-1A0A087WYE8 117 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 FAM74A7A6NL05 159 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 JMJD7P0C870 316 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF728P0DKX0 622 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 OR13C7P0DN81 318 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 VSIG8P0DPA2 414 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 TUBG1P23258 451 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 ASCL1P50553 236 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 RPS18P62269 152 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 SLC35A1P78382 337 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 PLGLB1Q02325 96 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 MALLQ13021 153 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 FAM74A3Q4VXF1 159 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 AVPI1Q5T686 147 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 FLVCR1-AS1Q8TAF5 88 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 LHFPL5Q8TAF8 219 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 PBDC1Q9BVG4 233 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 ATPIF1Q9UII2 106 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 FNDC1Q4ZHG4 1894 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 NCOR1O75376 2440 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 M0R135 149 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 SPRY1O43609 319 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 SNRNP200O75643 2136 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 BCKDHBP21953 392 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 CXCL12P48061 93 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 SCAND1P57086 179 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 INPP5JQ15735 1006 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 C6orf201Q7Z4U5 140 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 YRDCQ86U90 279 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 SLC26A10Q8NG04 563 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 ROBO4Q8WZ75 1007 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF799Q96GE5 643 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF845Q96IR2 970 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 GPX7Q96SL4 187 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 PRMT8Q9NR22 394 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 FAM212BQ9NTI7 297 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 PADI1Q9ULC6 663 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 WIF1Q9Y5W5 379 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 TRBV5-7A0A0A0MS05 114 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 MFSD2BA6NFX1 497 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 OR2A4O95047 310 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 CD1AP06126 327 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 POU2F2P09086 479 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 OR5H8P0DN80 308 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 CD79AP11912 226 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 HIST1H1DP16402 221 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 S100A2P29034 98 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 RPL12P30050 165 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 FASLGP48023 281 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 RPS4XP62701 263 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 SLC16A14Q7RTX9 510 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 BHLHE23Q8NDY6 225 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 TMEM104Q8NE00 496 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 OR2A7Q96R45 310 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 PAPOLGQ9BWT3 736 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 CNTNAP3Q9BZ76 1288 aa6.11□□□□□ -1.43
SYNPO2-206ENST00000610556 RHOFQ9HBH0 211 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms