RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TBX1O43435 398 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 XRCC2O43543 280 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 ECDO95905 644 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 IGHV4-59P01825 116 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 DDOSTP39656 456 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 ENTPD1P49961 510 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 ELF3P78545 371 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 PPP1R8Q12972 351 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 OCLNQ16625 522 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 PCK2Q16822 640 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 TEX30Q5JUR7 227 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 BRICD5Q6PL45 260 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 RASSF6Q6ZTQ3 369 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 FGFRL1Q8N441 504 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 LINC00471Q8N535 108 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 SCCPDHQ8NBX0 429 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 OR8S1Q8NH09 359 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 ST8SIA4Q92187 359 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 DYRK2Q92630 601 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 SPSB4Q96A44 273 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 SGK3Q96BR1 496 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 CCL13Q99616 98 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 TSSK6Q9BXA6 273 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 OPA3Q9H6K4 179 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 RNPEPL1Q9HAU8 725 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 RPUSD1Q9UJJ7 312 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 CMYA5Q8N3K9 4069 aa11.05□□□□□ -0.64
POLR2J3-219ENST00000608621 ZNF878C9JN71 531 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 GPR137BO60478 399 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 SNX3O60493 162 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 CLUP10909 449 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 SPI1P17947 270 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 GRK5P34947 590 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 IER3P46695 156 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 FAM3AP98173 230 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 CRMP1Q14194 572 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 C11orf91Q3C1V1 193 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 RHOUQ7L0Q8 258 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 SLC16A9Q7RTY1 509 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 DPY19L4Q7Z388 723 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 WDR86Q86TI4 376 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 LRRC29Q8WV35 223 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 SEH1LQ96EE3 360 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 NMNAT2Q9BZQ4 307 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 PPP1R3EQ9H7J1 279 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
POLR2J3-219ENST00000608621 A0A1B0GW55 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DHRS12A0PJE2 317 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 M0QZ24 198 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 TIMM23O14925 209 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 CCNB2O95067 398 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 ANXA2P07355 339 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L2P0CJ85 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L3P0CJ86 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L4P0CJ87 422 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L5P0CJ88 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L6P0CJ89 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L7P0CJ90 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 MUC1P15941 1255 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 SLC15A1P46059 708 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 CX3CR1P49238 355 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 SLC25A1P53007 311 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 RPL15P61313 204 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 EIF2B1Q14232 305 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 TIGD6Q17RP2 521 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 MICBQ29980 383 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 CDONQ4KMG0 1287 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 ZNF770Q6IQ21 691 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4L9Q6RFH8 374 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 WDR82Q6UXN9 313 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 CYP2R1Q6VVX0 501 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DEFB107AQ8IZN7 70 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 OR1M1Q8NGA1 313 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 OR4Q3Q8NH05 313 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 REEP6Q96HR9 211 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 ARL8BQ9NVJ2 186 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 DUX4Q9UBX2 424 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 KPTNQ9Y664 436 aa11.03□□□□□ -0.64
POLR2J3-219ENST00000608621 A0A1B0GVI7 797 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 HSD11B1P28845 292 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 NAA10P41227 235 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 GRB2P62993 217 aaKnown RBP11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 CSNK2BP67870 215 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 WDR38Q5JTN6 314 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 LINC01590Q5TEZ4 76 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 ASPHD2Q6ICH7 369 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 FAM57BQ71RH2 274 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 SLC36A1Q7Z2H8 476 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 CPLX4Q7Z7G2 160 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 LDLRAD3Q86YD5 345 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 AQP11Q8NBQ7 271 aa11.02□□□□□ -0.65
POLR2J3-219ENST00000608621 LY6G5BQ8NDX9 201 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms