RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 PAPD5Q8NDF8 572 aaKnown RBP5.19□□□□□ -1.58
CUX1-220ENST00000607092 OR4F17Q8NGA8 305 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 OR5D13Q8NGL4 314 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 OR8S1Q8NH09 359 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ST8SIA4Q92187 359 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 SLC7A6Q92536 515 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ITFG2Q969R8 447 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ANAPC16Q96DE5 110 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 MED30Q96HR3 178 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 CLPTM1LQ96KA5 538 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 RAB3IPQ96QF0 476 aaPredicted RBP5.19□□□□□ -1.58
CUX1-220ENST00000607092 OR4F4Q96R69 305 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 CDCA4Q9BXL8 241 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 NPFFR1Q9GZQ6 430 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 MYLK2Q9H1R3 596 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 METTL8Q9H825 291 aaKnown RBP5.19□□□□□ -1.58
CUX1-220ENST00000607092 NECAP2Q9NVZ3 263 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 C1orf123Q9NWV4 160 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ONECUT1Q9UBC0 465 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 PRPF19Q9UMS4 504 aaKnown RBP5.19□□□□□ -1.58
CUX1-220ENST00000607092 LHFPL6Q9Y693 200 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A0G2JND7 137 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 UNC119BA6NIH7 251 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 NKX6-3A6NJ46 265 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 ANXA2P2A6NMY6 339 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 F5H5K5 113 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 H0YHG0 523 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 M0R135 149 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 M0R1W7 72 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SOCS2O14508 198 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 MRASO14807 208 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 NPFFO15130 113 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 XRCC2O43543 280 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 PTP4A3O75365 173 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 ZNF682O95780 498 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 HLA-DQA2P01906 255 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SCG5P05408 212 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 H1F0P07305 194 aaKnown RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 GNALP38405 381 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 PMELP40967 661 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 GPR4P46093 362 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 BLVRAP53004 296 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 IL5RAQ01344 420 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 EGR3Q06889 387 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 FHL1Q13642 323 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 MPPED2Q15777 294 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 FAM189A2Q15884 450 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 KRTAP27-1Q3LI81 207 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 FAM201AQ5SY85 155 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 ATPAF1Q5TC12 328 aaPredicted RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 PRAMEF6Q5VXH4 476 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SFRP4Q6FHJ7 346 aaPredicted RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 SLC35E4Q6ICL7 350 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SLC18B1Q6NT16 456 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 RPL13AP3Q6NVV1 102 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 ASRGL1Q7L266 308 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 VMO1Q7Z5L0 202 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 FAM90A1Q86YD7 464 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 C1QL4Q86Z23 238 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 MICU2Q8IYU8 434 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 BOLLQ8N9W6 283 aaKnown RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 LY6G5BQ8NDX9 201 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 BEND2Q8NDZ0 799 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SLC26A10Q8NG04 563 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 OR51G2Q8NGK0 314 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 C8orf46Q8TAG6 207 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SLC7A13Q8TCU3 470 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 MRAPQ8TCY5 172 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SGCDQ92629 289 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 TAF15Q92804 592 aaKnown RBP eCLIP5.18□□□□□ -1.58
CUX1-220ENST00000607092 ZNF799Q96GE5 643 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 NSL1Q96IY1 281 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 RSRC1Q96IZ7 334 aaKnown RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 TMEM120AQ9BXJ8 343 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 GPR61Q9BZJ8 451 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 CTSZQ9UBR2 303 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 ZMAT5Q9UDW3 170 aaKnown RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 CYB5R1Q9UHQ9 305 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 PITPNC1Q9UKF7 332 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SIGLEC7Q9Y286 467 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SF3B6Q9Y3B4 125 aaKnown RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 MAB21L2Q9Y586 359 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 IER3IP1Q9Y5U9 82 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 SOX21Q9Y651 276 aaPredicted RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 CAPN7Q9Y6W3 813 aa5.18□□□□□ -1.58
CUX1-220ENST00000607092 TET2Q6N021 2002 aaPredicted RBP5.18□□□□□ -1.58
CUX1-220ENST00000607092 TRBV23-1A0A0A0MS06 115 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 IGLV1-36A0A0B4J1U3 117 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 IGHV3-64DA0A0J9YX35 117 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 MEIOCA2RUB1 952 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 CDC42EP2O14613 210 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 OR10H3O60404 316 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 PEX14O75381 377 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 LHBP01229 141 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 GYPAP02724 150 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 GRPP07492 148 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 T-ENOLP0DO92 83 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 RHCEP18577 417 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 CALB2P22676 271 aa5.17□□□□□ -1.58
CUX1-220ENST00000607092 PRDX6P30041 224 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms