RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CLPSL1A2RUU4 121 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 ANKRD30BLA7E2S9 258 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 TBX1O43435 398 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 ECDO95905 644 aaPredicted RBP10.87□□□□□ -0.67
RPS28-204ENST00000602140 CLUP10909 449 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 SPI1P17947 270 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 DDOSTP39656 456 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 PPP1R8Q12972 351 aaKnown RBP10.87□□□□□ -0.67
RPS28-204ENST00000602140 MIDNQ504T8 468 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 TEX30Q5JUR7 227 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 TEX36Q5VZQ5 186 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 ZNF770Q6IQ21 691 aaPredicted RBP10.87□□□□□ -0.67
RPS28-204ENST00000602140 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 CYP2R1Q6VVX0 501 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 SLC16A9Q7RTY1 509 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 FGFRL1Q8N441 504 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 LINC00471Q8N535 108 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 AQP11Q8NBQ7 271 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 SCCPDHQ8NBX0 429 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 OR6K6Q8NGW6 343 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 OR8S1Q8NH09 359 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 ST8SIA4Q92187 359 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 SPSB4Q96A44 273 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 ARL8BQ9NVJ2 186 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 KAAG1Q9UBP8 84 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
RPS28-204ENST00000602140 VWFP04275 2813 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 A0A0U1RQK1 487 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 DHRS12A0PJE2 317 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CCNB2O95067 398 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 SOX14O95416 240 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 IGHV4-59P01825 116 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 ANXA2P07355 339 aaKnown RBP10.86□□□□□ -0.67
RPS28-204ENST00000602140 GRK5P34947 590 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 SLC15A1P46059 708 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CX3CR1P49238 355 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 SLC25A1P53007 311 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 GRB2P62993 217 aaKnown RBP10.86□□□□□ -0.67
RPS28-204ENST00000602140 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
RPS28-204ENST00000602140 FAM3AP98173 230 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 TIGD6Q17RP2 521 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 MICBQ29980 383 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 C11orf91Q3C1V1 193 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 DPY19L4Q7Z388 723 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CPLX4Q7Z7G2 160 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 WDR86Q86TI4 376 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 DEFB107AQ8IZN7 70 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 OR4Q3Q8NH05 313 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 LRRC29Q8WV35 223 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 DYRK2Q92630 601 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 SGK3Q96BR1 496 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 REEP6Q96HR9 211 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CCT8L2Q96SF2 557 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CCL13Q99616 98 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CITED1Q99966 193 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 NMNAT2Q9BZQ4 307 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 CNTD2Q9H8S5 307 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 RNPEPL1Q9HAU8 725 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 RPUSD1Q9UJJ7 312 aaKnown RBP10.86□□□□□ -0.67
RPS28-204ENST00000602140 BAIAP2Q9UQB8 552 aa10.86□□□□□ -0.67
RPS28-204ENST00000602140 TGP01266 2768 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 A0A1B0GW55 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 GPR137BO60478 399 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L2P0CJ85 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L3P0CJ86 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L4P0CJ87 422 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L5P0CJ88 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L6P0CJ89 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L7P0CJ90 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 MUC1P15941 1255 aaPredicted RBP10.85□□□□□ -0.67
RPS28-204ENST00000602140 HSD11B1P28845 292 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 KRTAP10-3P60369 221 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
RPS28-204ENST00000602140 CSNK2BP67870 215 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 MXRA7P84157 204 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 EIF2B1Q14232 305 aaKnown RBP10.85□□□□□ -0.67
RPS28-204ENST00000602140 OCLNQ16625 522 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 SPATS1Q496A3 300 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 CDONQ4KMG0 1287 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 WDR38Q5JTN6 314 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4L9Q6RFH8 374 aaPredicted RBP10.85□□□□□ -0.67
RPS28-204ENST00000602140 C16orf89Q6UX73 402 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 WDR82Q6UXN9 313 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 VMO1Q7Z5L0 202 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 OR2T33Q8NG76 320 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 OR1M1Q8NGA1 313 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 SEH1LQ96EE3 360 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 TOR3AQ9H497 397 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 PPP1R3EQ9H7J1 279 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 ARMC1Q9NVT9 282 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DNAJC27Q9NZQ0 273 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 ACTR3BQ9P1U1 418 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 DUX4Q9UBX2 424 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 KPTNQ9Y664 436 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 U3KQV3 271 aa10.85□□□□□ -0.67
RPS28-204ENST00000602140 hCG_38984A0A1B0GV85 526 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 A0A1B0GVI7 797 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms