RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TIGD4Q8IY51 512 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 BCL6BQ8N143 479 aaPredicted RBP13.16□□□□□ -0.3
VRK3-221ENST00000600284 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 RGCCQ9H4X1 137 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 MED20Q9H944 212 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 C1orf123Q9NWV4 160 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 OOEPA6NGQ2 149 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 DNAJC9-AS1A6NH13 148 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 PRR23D1E9PI22 279 aaPredicted RBP13.15□□□□□ -0.3
VRK3-221ENST00000600284 PRODHO43272 600 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 TIPRLO75663 272 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 GRPP07492 148 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 PRR23D2P0DMB1 279 aaPredicted RBP13.15□□□□□ -0.3
VRK3-221ENST00000600284 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 OSMP13725 252 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 ANXA8P13928 327 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 CDK5Q00535 292 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 GINS1Q14691 196 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 OR8B8Q15620 311 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 DNAL1Q4LDG9 190 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 SFRP4Q6FHJ7 346 aaPredicted RBP13.15□□□□□ -0.3
VRK3-221ENST00000600284 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 TRPM8Q7Z2W7 1104 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 TMEM179BQ7Z7N9 219 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 IQCF1Q8N6M8 205 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 C19orf18Q8NEA5 215 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 CSNK2A3Q8NEV1 391 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 OR8S1Q8NH09 359 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 SGMS2Q8NHU3 365 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 OTOSQ8NHW6 89 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 OTULINQ96BN8 352 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 ZNF48Q96MX3 618 aaPredicted RBP13.15□□□□□ -0.3
VRK3-221ENST00000600284 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 OR51V1Q9H2C8 321 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 RNPEPL1Q9HAU8 725 aa13.15□□□□□ -0.3
VRK3-221ENST00000600284 hCG_38984A0A1B0GV85 526 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 GYG2O15488 501 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 LYNP07948 512 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 RNASE1P07998 156 aaKnown RBP13.14□□□□□ -0.31
VRK3-221ENST00000600284 H2BFMP0C1H6 154 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 POU1F1P28069 291 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 ZNF121P58317 390 aaPredicted RBP13.14□□□□□ -0.31
VRK3-221ENST00000600284 SLC35D3Q5M8T2 416 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 TEX36Q5VZQ5 186 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 FAM57BQ71RH2 274 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.14□□□□□ -0.31
VRK3-221ENST00000600284 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 PAPD5Q8NDF8 572 aaKnown RBP13.14□□□□□ -0.31
VRK3-221ENST00000600284 C1orf147Q96MC9 270 aaPredicted RBP13.14□□□□□ -0.31
VRK3-221ENST00000600284 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 MMADHCQ9H3L0 296 aaPredicted RBP13.14□□□□□ -0.31
VRK3-221ENST00000600284 PRDM13Q9H4Q3 707 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 NIPAL2Q9H841 368 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 KAAG1Q9UBP8 84 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 CTSZQ9UBR2 303 aa13.14□□□□□ -0.31
VRK3-221ENST00000600284 TRAV40A0A0B4J280 105 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 A6NLC8 198 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 C22orf46C9J442 243 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 C3orf80F5H4A9 247 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 ADAM20O43506 726 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 E2F6O75461 281 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 MUC1P15941 1255 aaPredicted RBP13.13□□□□□ -0.31
VRK3-221ENST00000600284 CFHR2P36980 270 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 GSK3AP49840 483 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 FGF12P61328 243 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 FLOT2Q14254 428 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 ZNF826PQ6ZT77 177 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 C11orf53Q8IXP5 236 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
VRK3-221ENST00000600284 PNLDC1Q8NA58 520 aaKnown RBP13.13□□□□□ -0.31
VRK3-221ENST00000600284 DNAJC9Q8WXX5 260 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 ITFG2Q969R8 447 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 AMELYQ99218 206 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 ABCB9Q9NP78 766 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 ZNF391Q9UJN7 358 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 NBEAL1Q6ZS30 2694 aa13.13□□□□□ -0.31
VRK3-221ENST00000600284 TENM1Q9UKZ4 2725 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 TCRBV3S1A0A5B6 114 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 P2RY10O00398 339 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
VRK3-221ENST00000600284 GNALP38405 381 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 NAA10P41227 235 aaPredicted RBP13.12□□□□□ -0.31
VRK3-221ENST00000600284 CBX1P83916 185 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 IL5RAQ01344 420 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 SLC9A3R2Q15599 337 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 MICBQ29980 383 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 GPR157Q5UAW9 335 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms