RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SPRYD4Q8WW59 207 aaPredicted RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 SPTSSAQ969W0 71 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 NEIL1Q96FI4 390 aaPredicted RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 DUX5Q96PT3 197 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 OR8B2Q96RD0 313 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 MBOAT4Q96T53 435 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 TMEM246Q9BRR3 403 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 TEX12Q9BXU0 123 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 GABARAPL3Q9BY60 117 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 MS4A7Q9GZW8 240 aaPredicted RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 PNRC2Q9NPJ4 139 aaKnown RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 USE1Q9NZ43 259 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 IGHV2-70DA0A0C4DH43 119 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 M0R135 149 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 SPRY1O43609 319 aaPredicted RBP15.66■□□□□ 0.1
PNKP-213ENST00000599543 FSTL3O95633 263 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 MRPL3P09001 348 aaKnown RBP15.66■□□□□ 0.1
PNKP-213ENST00000599543 PPIAL4GP0DN37 164 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 SLC2A5P22732 501 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 CD80P33681 288 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 ALDH3A2P51648 485 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 RAD23AP54725 363 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 FOXL1Q12952 345 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 BAMBIQ13145 260 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 TUSC1Q2TAM9 212 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 LPCAT4Q643R3 524 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 NAA40Q86UY6 237 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 OR11L1Q8NGX0 322 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 UBE2FQ969M7 185 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 ERGIC1Q969X5 290 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 EME1Q96AY2 570 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 ZNF799Q96GE5 643 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 INTS14Q96SY0 518 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 AMELYQ99218 206 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 C9orf16Q9BUW7 83 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 TOR3AQ9H497 397 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 CENPMQ9NSP4 180 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 ORC6Q9Y5N6 252 aa15.66■□□□□ 0.1
PNKP-213ENST00000599543 CCDC182A6NF36 153 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 HKR1P10072 659 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 PITPNBP48739 271 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 HCCSP53701 268 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 PAX2Q02962 417 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 MAB21L1Q13394 359 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 EIF2B1Q14232 305 aaKnown RBP15.65■□□□□ 0.1
PNKP-213ENST00000599543 FAM201AQ5SY85 155 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 ZBTB49Q6ZSB9 765 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 DPY19L4Q7Z388 723 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 TIGD4Q8IY51 512 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 GALNT4Q8N4A0 578 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 RAB40AQ8WXH6 277 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 SLC22A4Q9H015 551 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 CLN8Q9UBY8 286 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 AASSQ9UDR5 926 aa15.65■□□□□ 0.1
PNKP-213ENST00000599543 NOP16Q9Y3C1 178 aaKnown RBP15.65■□□□□ 0.1
PNKP-213ENST00000599543 IGHV3OR16-10A0A075B7F0 116 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 IGHV4-38-2P0DP08 117 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 ANOS1P23352 680 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 PMELP40967 661 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 CD200P41217 278 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 MTNR1AP48039 350 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 ELF3P78545 371 aaPredicted RBP15.64■□□□□ 0.09
PNKP-213ENST00000599543 OR8G1Q15617 311 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 DCDC5Q6ZRR9 648 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 FAM81AQ8TBF8 368 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 TMEM163Q8TC26 289 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 Q8TCH9 128 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 SLC25A28Q96A46 364 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 ZNF48Q96MX3 618 aaPredicted RBP15.64■□□□□ 0.09
PNKP-213ENST00000599543 TTTY10Q9BZA0 68 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 UFSP2Q9NUQ7 469 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 DNAJC27Q9NZQ0 273 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 KLHDC2Q9Y2U9 406 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 N6AMT1Q9Y5N5 214 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 PKD1L1Q8TDX9 2849 aa15.64■□□□□ 0.09
PNKP-213ENST00000599543 TRAV40A0A0B4J280 105 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 C5orf63A6NC05 138 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 PHYHO14832 338 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 FAM20BO75063 409 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 EGR1P18146 543 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 CA6P23280 308 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 SNAI3Q3KNW1 292 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 PRAMEF6Q5VXH4 476 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 UPRTQ96BW1 309 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 SLAMF6Q96DU3 332 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 C1orf147Q96MC9 270 aaPredicted RBP15.63■□□□□ 0.09
PNKP-213ENST00000599543 NUDT16L1Q9BRJ7 211 aaKnown RBP15.63■□□□□ 0.09
PNKP-213ENST00000599543 COPS4Q9BT78 406 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 ADAT1Q9BUB4 502 aaKnown RBP15.63■□□□□ 0.09
PNKP-213ENST00000599543 PRRG3Q9BZD7 231 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 FN3KRPQ9HA64 309 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 ENOPH1Q9UHY7 261 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 PCDHGB1Q9Y5G3 927 aa15.63■□□□□ 0.09
PNKP-213ENST00000599543 GGT3PA6NGU5 568 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 CD300LBA8K4G0 201 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 PRODHO43272 600 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 APOL3O95236 402 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 RNASE1P07998 156 aaKnown RBP15.62■□□□□ 0.09
PNKP-213ENST00000599543 PEX2P28328 305 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 PRKXP51817 358 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms