RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 UBCP0CG48 685 aaKnown RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 TNFSF4P23510 183 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 KIR3DL2P43630 455 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 MAP2K3P46734 347 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 CCR9P51686 369 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 ALKBH1Q13686 389 aaKnown RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 OR2G6Q5TZ20 316 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 RNLSQ5VYX0 342 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 PRSS35Q8N3Z0 413 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 FTMTQ8N4E7 242 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 CSNK2A3Q8NEV1 391 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 ELMOD3Q96FG2 381 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 FAM71F1Q96KD3 344 aaPredicted RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 SLC22A4Q9H015 551 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 CXXC4Q9H2H0 198 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 DUSP21Q9H596 190 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 PAK1IP1Q9NWT1 392 aaPredicted RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 UBAP1Q9NZ09 502 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 ITGB1BP2Q9UKP3 347 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 ERGIC3Q9Y282 383 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 CHD3Q12873 2000 aaKnown RBP12.22□□□□□ -0.45
VRK3-213ENST00000597215 A0A1B0GVI7 797 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 P2RY10O00398 339 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 TPD52L2O43399 206 aaKnown RBP12.22□□□□□ -0.45
VRK3-213ENST00000597215 RGS10O43665 173 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 LILRA1O75019 489 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 CD55P08174 381 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 MAGEB1P43366 347 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 TGM4P49221 684 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 TSTQ16762 297 aaKnown RBP12.22□□□□□ -0.45
VRK3-213ENST00000597215 ODF4Q2M2E3 257 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 TMEM244Q5VVB8 128 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 PRSS57Q6UWY2 283 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 DOK3Q7L591 496 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 CCDC54Q8NEL0 328 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 SEMA6DQ8NFY4 1073 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 OR2Z1Q8NG97 314 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 CDCA4Q9BXL8 241 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 YTHDF1Q9BYJ9 559 aaKnown RBP12.22□□□□□ -0.45
VRK3-213ENST00000597215 EGLN1Q9GZT9 426 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
VRK3-213ENST00000597215 TRIM36Q9NQ86 728 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 DECR2Q9NUI1 292 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 FRRS1LQ9P0K9 344 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 ERVK-18Q9QC07 812 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 CSMD1Q96PZ7 3565 aa12.22□□□□□ -0.45
VRK3-213ENST00000597215 A0A1B0GWJ7 208 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 E9PI62 339 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 SYT7O43581 403 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 SSX4O60224 188 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 DHRS3O75911 302 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 NCR1O76036 304 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 RPSAP08865 295 aaKnown RBP12.21□□□□□ -0.45
VRK3-213ENST00000597215 CCL1P22362 96 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 CA6P23280 308 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 EEF1B2P24534 225 aaKnown RBP12.21□□□□□ -0.45
VRK3-213ENST00000597215 ACKR3P25106 362 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 WNT4P56705 351 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
VRK3-213ENST00000597215 CCL8P80075 99 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 TNFAIP6P98066 277 aaPredicted RBP12.21□□□□□ -0.45
VRK3-213ENST00000597215 RIPPLY1Q0D2K3 151 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 TNK1Q13470 666 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 OR8G1Q15617 311 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 CCDC58Q4VC31 144 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 Q5PR19 223 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 ZBTB37Q5TC79 503 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 SHEQ5VZ18 495 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 RPL22L1Q6P5R6 122 aaKnown RBP12.21□□□□□ -0.45
VRK3-213ENST00000597215 Q6ZSR3 168 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 PRSS48Q7RTY5 328 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 KLBQ86Z14 1044 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 NANOGP1Q8N7R0 232 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 PLPP7Q8NBV4 271 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 GATAD2BQ8WXI9 593 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 SGCDQ92629 289 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 SOX7Q9BT81 388 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 ADAT1Q9BUB4 502 aaKnown RBP12.21□□□□□ -0.45
VRK3-213ENST00000597215 MND1Q9BWT6 205 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 COMMD4Q9H0A8 199 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 SAP30LQ9HAJ7 183 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 ABCB9Q9NP78 766 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 BABAM2Q9NXR7 383 aa12.21□□□□□ -0.45
VRK3-213ENST00000597215 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
VRK3-213ENST00000597215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
VRK3-213ENST00000597215 ZNF816-ZNF321PA0A0X1KG74 233 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 LOC107986453A0A1B0GWG9 222 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 TMEM212A6NML5 194 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 OR4C45A6NMZ5 311 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 DHRS7CA6NNS2 312 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 MLNRO43193 412 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 GMDSO60547 372 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 LY6HO94772 140 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 HPXP02790 462 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 MT-ND2P03891 347 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 ISG15P05161 165 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms