RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 LRRC30A6NM36 301 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 PRR32B1ATL7 298 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 XRCC2O43543 280 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 MITFO75030 526 aaPredicted RBP14.85□□□□□ -0.03
PNKP-206ENST00000595792 FSTL3O95633 263 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 HMGN1P05114 100 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 ANXA2P07355 339 aaKnown RBP14.85□□□□□ -0.03
PNKP-206ENST00000595792 EPHA2P29317 976 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 NAA10P41227 235 aaPredicted RBP14.85□□□□□ -0.03
PNKP-206ENST00000595792 PITPNBP48739 271 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 CRISP1P54107 249 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 BAMBIQ13145 260 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 ZNF841Q6ZN19 808 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 SHFQ7M4L6 423 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 C11orf53Q8IXP5 236 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 OR8B3Q8NGG8 313 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 NRBF2Q96F24 287 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 REEP6Q96HR9 211 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 OR8B2Q96RD0 313 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 MS4A7Q9GZW8 240 aaPredicted RBP14.85□□□□□ -0.03
PNKP-206ENST00000595792 TOR3AQ9H497 397 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 YY1AP1Q9H869 796 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 ZNF556Q9HAH1 456 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 BRD7Q9NPI1 651 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 MRPL15Q9P015 296 aaKnown RBP14.85□□□□□ -0.03
PNKP-206ENST00000595792 MIOXQ9UGB7 285 aa14.85□□□□□ -0.03
PNKP-206ENST00000595792 M0R129 80 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 TNFRSF13BO14836 293 aaPredicted RBP14.84□□□□□ -0.03
PNKP-206ENST00000595792 PRODHO43272 600 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 SPRY1O43609 319 aaPredicted RBP14.84□□□□□ -0.03
PNKP-206ENST00000595792 GMDSO60547 372 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 FCN3O75636 299 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 HKR1P10072 659 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 PAICSP22234 425 aaKnown RBP14.84□□□□□ -0.03
PNKP-206ENST00000595792 PRTN3P24158 256 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 HSD11B1P28845 292 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 SLC15A1P46059 708 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 APOFQ13790 326 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 BTNL3Q6UXE8 466 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 BOLLQ8N9W6 283 aaKnown RBP14.84□□□□□ -0.03
PNKP-206ENST00000595792 OR5K1Q8NHB7 308 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 THEM6Q8WUY1 208 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 RAB40AQ8WXH6 277 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 ERGIC1Q969X5 290 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 LYZL4Q96KX0 146 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 SLC22A4Q9H015 551 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 PAPOLBQ9NRJ5 636 aaKnown RBP14.84□□□□□ -0.03
PNKP-206ENST00000595792 TVP23BQ9NYZ1 205 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 CTSZQ9UBR2 303 aa14.84□□□□□ -0.03
PNKP-206ENST00000595792 C22orf46C9J442 243 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 C3orf80F5H4A9 247 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 LYNP07948 512 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 H2BFMP0C1H6 154 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 IRF2P14316 349 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 PTGES3Q15185 160 aaKnown RBP14.83□□□□□ -0.04
PNKP-206ENST00000595792 ATP6AP1Q15904 470 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 SFRP4Q6FHJ7 346 aaPredicted RBP14.83□□□□□ -0.04
PNKP-206ENST00000595792 LRRN1Q6UXK5 716 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 RHOUQ7L0Q8 258 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 BCDIN3DQ7Z5W3 292 aaKnown RBP14.83□□□□□ -0.04
PNKP-206ENST00000595792 C1orf87Q8N0U7 546 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 UPRTQ96BW1 309 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 FGF23Q9GZV9 251 aaPredicted RBP14.83□□□□□ -0.04
PNKP-206ENST00000595792 RNF7Q9UBF6 113 aa14.83□□□□□ -0.04
PNKP-206ENST00000595792 PRKYO43930 277 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 PLATP00750 562 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 GRPP07492 148 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 ALOX5APP20292 161 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 ACKR3P25106 362 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 PSMB10P40306 273 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 GSK3AP49840 483 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 ELF3P78545 371 aaPredicted RBP14.82□□□□□ -0.04
PNKP-206ENST00000595792 EFNB1P98172 346 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 SNAPC1Q16533 368 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 TIGD6Q17RP2 521 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 SLC35D3Q5M8T2 416 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 WDR25Q64LD2 544 aaPredicted RBP14.82□□□□□ -0.04
PNKP-206ENST00000595792 BRD3OSQ6XYD6 125 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 DCDC5Q6ZRR9 648 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 NLRC3Q7RTR2 1065 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 AMIGO2Q86SJ2 522 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 GCSAMQ8N6F7 178 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 OR11L1Q8NGX0 322 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 DUS3LQ96G46 650 aaKnown RBP14.82□□□□□ -0.04
PNKP-206ENST00000595792 PLEKHA8Q96JA3 519 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 NUDT16L1Q9BRJ7 211 aaKnown RBP14.82□□□□□ -0.04
PNKP-206ENST00000595792 MMADHCQ9H3L0 296 aaPredicted RBP14.82□□□□□ -0.04
PNKP-206ENST00000595792 OPA3Q9H6K4 179 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 FN3KRPQ9HA64 309 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 C1orf123Q9NWV4 160 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 CLN8Q9UBY8 286 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 COPS3Q9UNS2 423 aa14.82□□□□□ -0.04
PNKP-206ENST00000595792 PSMD9O00233 223 aa14.81□□□□□ -0.04
PNKP-206ENST00000595792 MRPL3P09001 348 aaKnown RBP14.81□□□□□ -0.04
PNKP-206ENST00000595792 DDOSTP39656 456 aa14.81□□□□□ -0.04
PNKP-206ENST00000595792 RASSF2P50749 326 aa14.81□□□□□ -0.04
PNKP-206ENST00000595792 FGF12P61328 243 aa14.81□□□□□ -0.04
PNKP-206ENST00000595792 SLC9A3R2Q15599 337 aa14.81□□□□□ -0.04
PNKP-206ENST00000595792 GFOD2Q3B7J2 385 aa14.81□□□□□ -0.04
PNKP-206ENST00000595792 ZNF454Q8N9F8 522 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms