RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 R4GMQ9 66 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 ZANQ9Y493 2812 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 DAPL1A0PJW8 107 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 METTL15A6NJ78 407 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 CLDN25C9JDP6 229 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 H3BSH0 61 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 TACSTD2P09758 323 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 TNFRSF1AP19438 455 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 DCTDP32321 178 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 PSMB10P40306 273 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 PMELP40967 661 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 MMP16P51512 607 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 AQP4P55087 323 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 ISL1P61371 349 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 HOXA4Q00056 320 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 BCL2L15Q5TBC7 163 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 LIPNQ5VXI9 398 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 TTC23Q5W5X9 447 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 COMMD2Q86X83 199 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF540Q8NDQ6 660 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 OR52I1Q8NGK6 324 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 OR51E1Q8TCB6 317 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 RORBQ92753 470 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 RGCCQ9H4X1 137 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 GCM1Q9NP62 436 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 TMEM106BQ9NUM4 274 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 MRPL15Q9P015 296 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 NUFIP1Q9UHK0 495 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 GNG8Q9UK08 70 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 OR52A1Q9UKL2 312 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 PPP1R3CQ9UQK1 317 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 SLC22A13Q9Y226 551 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 RHBDD3Q9Y3P4 386 aa11.64□□□□□ -0.55
SHKBP1-207ENST00000595631 ARHGAP32A7KAX9 2087 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 LOC100289279A0A1B0GTE1 492 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ACOD1A6NK06 481 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 SNTNA6NMZ2 147 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ANKRD30BLA7E2S9 258 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 P2RY10O00398 339 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 CYB5R3P00387 301 aaPredicted RBP11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 IGLV3-1P01715 115 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 HEXAP06865 529 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 IGHV4-31P0DP07 118 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 CFL1P23528 166 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 SRP9P49458 86 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 TMEM33P57088 247 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 OR12D2P58182 307 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ACTC1P68032 377 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ACTA1P68133 377 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 MPPED2Q15777 294 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ODF4Q2M2E3 257 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 LHFPL3Q86UP9 236 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 CLDND2Q8NHS1 167 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 PAPOLGQ9BWT3 736 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 VCXQ9H320 206 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 UFSP2Q9NUQ7 469 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 SNX5Q9Y5X3 404 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 CSPG4Q6UVK1 2322 aa11.63□□□□□ -0.55
SHKBP1-207ENST00000595631 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.553e-7■■□□□ 13.4
SHKBP1-207ENST00000595631 A0A0U1RQV5 110 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 H0YAE9 185 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 FAM20BO75063 409 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 SULT1C4O75897 302 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF205O95201 554 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 ATP6V1G2O95670 118 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 DDOSTP39656 456 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 CD200P41217 278 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 CHN2P52757 468 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 CDONQ4KMG0 1287 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 DMRTC1Q5HYR2 192 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 WDR38Q5JTN6 314 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 FAM201AQ5SY85 155 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 C6orf52Q5T4I8 152 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 LAIR2Q6ISS4 152 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 FAM220AQ7Z4H9 259 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 WDR86Q86TI4 376 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 CATSPERDQ86XM0 798 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 ELMOD2Q8IZ81 293 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 PRSS35Q8N3Z0 413 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 SETD9Q8NE22 299 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF649Q9BS31 505 aa11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 FGF23Q9GZV9 251 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 RPL36Q9Y3U8 105 aaKnown RBP11.62□□□□□ -0.55
SHKBP1-207ENST00000595631 A0A1B0GTI1 187 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 ISPDA4D126 451 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF850A8MQ14 1090 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 J3QLW9 94 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 CD5LO43866 347 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 GMDSO60547 372 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 LMX1BO60663 402 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 IGHA1P01876 353 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 GRPP07492 148 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 FAHP16930 419 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms