RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MRPL15Q9P015 296 aaKnown RBP12.69□□□□□ -0.38
DDX39A-221ENST00000593026 PSORS1C1Q9UIG5 152 aa12.69□□□□□ -0.38
DDX39A-221ENST00000593026 SLC22A13Q9Y226 551 aa12.69□□□□□ -0.38
DDX39A-221ENST00000593026 EXOSC1Q9Y3B2 195 aaKnown RBP12.69□□□□□ -0.38
DDX39A-221ENST00000593026 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
DDX39A-221ENST00000593026 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 ANKRD30BLA7E2S9 258 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 H0YL77 283 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 SLC1A7O00341 560 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 MLNRO43193 412 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 CA6P23280 308 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 ETV1P50549 477 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 MRPS11P82912 194 aaKnown RBP12.68□□□□□ -0.38
DDX39A-221ENST00000593026 OR8G1Q15617 311 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 WDR38Q5JTN6 314 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 ZNF786Q8N393 782 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 STX19Q8N4C7 294 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 FTMTQ8N4E7 242 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 CSNK2A3Q8NEV1 391 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 FAM71F1Q96KD3 344 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-221ENST00000593026 SOX7Q9BT81 388 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 ADAT1Q9BUB4 502 aaKnown RBP12.68□□□□□ -0.38
DDX39A-221ENST00000593026 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 Q9H521 79 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 ISG20L2Q9H9L3 353 aaKnown RBP12.68□□□□□ -0.38
DDX39A-221ENST00000593026 GPR84Q9NQS5 396 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 CHCHD3Q9NX63 227 aaKnown RBP12.68□□□□□ -0.38
DDX39A-221ENST00000593026 SCN3BQ9NY72 215 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 IL19Q9UHD0 177 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 AKAP9Q99996 3911 aa12.68□□□□□ -0.38
DDX39A-221ENST00000593026 IGHV1-69-2A0A0G2JMI3 117 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 LOC390937A0A1W2PQ73 354 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 TRIM64A6NGJ6 449 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 TRIM64BA6NI03 449 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 F5H5P2 479 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 GMDSO60547 372 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 CDC14BO60729 498 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 MTRF1O75570 445 aaKnown RBP12.67□□□□□ -0.38
DDX39A-221ENST00000593026 IGLV3-1P01715 115 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 HTR1AP08908 422 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 ATP6V1B1P15313 513 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 ACKR3P25106 362 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 GNALP38405 381 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 MAP2K3P46734 347 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 MRPL28Q13084 256 aaKnown RBP12.67□□□□□ -0.38
DDX39A-221ENST00000593026 TNK1Q13470 666 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 FDX2Q6P4F2 183 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 TMPRSS11AQ6ZMR5 421 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 KLHL36Q8N4N3 616 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 C10orf105Q8TEF2 133 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 ITFG2Q969R8 447 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-221ENST00000593026 OR2V2Q96R30 315 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 PIMREGQ9BSJ6 248 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 PAPOLGQ9BWT3 736 aaKnown RBP12.67□□□□□ -0.38
DDX39A-221ENST00000593026 CHODLQ9H9P2 273 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 DLL4Q9NR61 685 aa12.67□□□□□ -0.38
DDX39A-221ENST00000593026 CAB39Q9Y376 341 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-221ENST00000593026 CHD3Q12873 2000 aaKnown RBP12.67□□□□□ -0.38
DDX39A-221ENST00000593026 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-221ENST00000593026 A0A1B0GVI7 797 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 NDUFS8O00217 210 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 P2RY10O00398 339 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 DHRS3O75911 302 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 CCDC159P0C7I6 412 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 UBCP0CG48 685 aaKnown RBP12.66□□□□□ -0.38
DDX39A-221ENST00000593026 ACHEP22303 614 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 CRYBB2P43320 205 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 KIR3DL2P43630 455 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 SRP9P49458 86 aaKnown RBP12.66□□□□□ -0.38
DDX39A-221ENST00000593026 GBX2P52951 348 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-221ENST00000593026 MVKQ03426 396 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 SPRNQ5BIV9 151 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 OR2G6Q5TZ20 316 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 DOK3Q7L591 496 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 KLBQ86Z14 1044 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 PRSS35Q8N3Z0 413 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 SEMA6DQ8NFY4 1073 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 HAVCR2Q8TDQ0 301 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 ITLN1Q8WWA0 313 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 DVL3Q92997 716 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-221ENST00000593026 YIPF5Q969M3 257 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 MEGF10Q96KG7 1140 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 FKBP14Q9NWM8 211 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 FRRS1LQ9P0K9 344 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 TPRKBQ9Y3C4 175 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 RHBDD3Q9Y3P4 386 aa12.66□□□□□ -0.38
DDX39A-221ENST00000593026 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 A0A1B0GTI1 187 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 PTGES3LE9PB15 166 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 RP2O75695 350 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms