RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 CFL1P23528 166 aaKnown RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 ACKR3P25106 362 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 DDOSTP39656 456 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 MDH2P40926 338 aaKnown RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 CDC42P60953 191 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 SEC61A1P61619 476 aaKnown RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 MFGE8Q08431 387 aaPredicted RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 OR8B8Q15620 311 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 DEGS2Q6QHC5 323 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 ZNF679Q8IYX0 411 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 KLHL36Q8N4N3 616 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 SPICQ8N5J4 248 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 Q8TCH9 128 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 ASB17Q8WXJ9 295 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 EME1Q96AY2 570 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 HRASLS5Q96KN8 279 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 MBOAT4Q96T53 435 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 SLC29A1Q99808 456 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 APOL4Q9BPW4 351 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 MROQ9BYG7 248 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 RGCCQ9H4X1 137 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 CLN6Q9NWW5 311 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 WARS2Q9UGM6 360 aaKnown RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 MXRA5Q9NR99 2828 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 SVEP1Q4LDE5 3571 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 TMEM269A0A1B0GVZ9 245 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 LRRC30A6NM36 301 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 F5H0A9 414 aaPredicted RBP13.18□□□□□ -0.3
LIG3-215ENST00000592690 ZNF254O75437 659 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 ANPEPP15144 967 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 SRD5A1P18405 259 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 HTR1FP30939 366 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
LIG3-215ENST00000592690 LCN2P80188 198 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 PLEKHG7Q6ZR37 379 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 SSX6Q7RTT6 188 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 WDR86Q86TI4 376 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 PPP1R14AQ96A00 147 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 TBX5Q99593 518 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 C9orf16Q9BUW7 83 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 PAPOLGQ9BWT3 736 aaKnown RBP13.18□□□□□ -0.3
LIG3-215ENST00000592690 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 IMPAD1Q9NX62 359 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 PCDHB10Q9UN67 800 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 RHBDD3Q9Y3P4 386 aa13.18□□□□□ -0.3
LIG3-215ENST00000592690 PPIAL4EA0A075B759 164 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.17□□□□□ -0.3
LIG3-215ENST00000592690 CEACAM18A8MTB9 384 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 ZNF670-ZNF695F2Z2N8 137 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 PPIAL4DF5H284 164 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 SRSF10O75494 262 aaKnown RBP13.17□□□□□ -0.3
LIG3-215ENST00000592690 PNPP00491 289 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 GRPP07492 148 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 PPIAL4FP0DN26 164 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 PCMT1P22061 227 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 ZFP36P26651 326 aaKnown RBP13.17□□□□□ -0.3
LIG3-215ENST00000592690 DCTDP32321 178 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 ZNF826PQ6ZT77 177 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 KLBQ86Z14 1044 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 C1orf87Q8N0U7 546 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 MUC20Q8N307 709 aaPredicted RBP13.17□□□□□ -0.3
LIG3-215ENST00000592690 SPERTQ8NA61 448 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 C19orf18Q8NEA5 215 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 OR11L1Q8NGX0 322 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 ERGIC1Q969X5 290 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 MNTQ99583 582 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 FN3KRPQ9HA64 309 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 AASSQ9UDR5 926 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 MRM2Q9UI43 246 aaKnown RBP13.17□□□□□ -0.3
LIG3-215ENST00000592690 PPIAL4AQ9Y536 164 aa13.17□□□□□ -0.3
LIG3-215ENST00000592690 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 A6NLC8 198 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 PHYHO14832 338 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 BAG2O95816 211 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 IRF2P14316 349 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 POU4F2Q12837 409 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 ZNF829Q3KNS6 432 aaPredicted RBP13.16□□□□□ -0.3
LIG3-215ENST00000592690 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 FAHD2BQ6P2I3 314 aaPredicted RBP13.16□□□□□ -0.3
LIG3-215ENST00000592690 ZBTB49Q6ZSB9 765 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 FAHD2AQ96GK7 314 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 C14orf119Q9NWQ9 140 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 C1orf123Q9NWV4 160 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 RNF7Q9UBF6 113 aa13.16□□□□□ -0.3
LIG3-215ENST00000592690 NUFIP1Q9UHK0 495 aaKnown RBP13.16□□□□□ -0.3
LIG3-215ENST00000592690 A0A1W2PQL4 384 aaPredicted RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 ZNF850A8MQ14 1090 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 ENTPD6O75354 484 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 AVPP01185 164 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 IGLV3-1P01715 115 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 TTRP02766 147 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms