RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NIPSNAP1Q9BPW8 284 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 IFT27Q9BW83 186 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 TSSK6Q9BXA6 273 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 OR2H1Q9GZK4 316 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 MS4A7Q9GZW8 240 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-226ENST00000591534 PLCXD1Q9NUJ7 323 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 TMEM106BQ9NUM4 274 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 GRHPRQ9UBQ7 328 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 IL20RAQ9UHF4 553 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 OPN4Q9UHM6 478 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 CACNG2Q9Y698 323 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 MEGF8Q7Z7M0 2845 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 LOC100509620A0A075B734 347 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 ZSCAN5BA6NJL1 495 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 CLDN34H7C241 214 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 RENP00797 406 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 FSHBP01225 129 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 AMY2AP04746 511 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 CD14P08571 375 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 PPIAL4GP0DN37 164 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 COX5BP10606 129 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 AMY2BP19961 511 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MSR1P21757 451 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 LAP3P28838 519 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MPV17P39210 176 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MDH2P40926 338 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 WNT5AP41221 380 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MECP2P51608 486 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 RPL27P61353 136 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 BTG1P62324 171 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 SCRN3Q0VDG4 424 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 GINS1Q14691 196 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 ZIK1Q3SY52 487 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 SLC35D3Q5M8T2 416 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 TBPL2Q6SJ96 375 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 LRRN1Q6UXK5 716 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 LRRC28Q86X40 367 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 OR2Z1Q8NG97 314 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MOSPD2Q8NHP6 518 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 RHOXF1Q8NHV9 184 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 GTF3AQ92664 365 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 DVL3Q92997 716 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 NABP1Q96AH0 204 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 DCLRE1CQ96SD1 692 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MNTQ99583 582 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MRPS26Q9BYN8 205 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 OR52D1Q9H346 318 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 PATZ1Q9HBE1 687 aaKnown RBP7.95□□□□□ -1.14
BRCA1-226ENST00000591534 MSL2Q9HCI7 577 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 ESM1Q9NQ30 184 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 INPP5EQ9NRR6 644 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 TBCCD1Q9NVR7 557 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 VNN3Q9NY84 501 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 IL19Q9UHD0 177 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 PPP1R3CQ9UQK1 317 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 SIGLEC7Q9Y286 467 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 UGT2A1Q9Y4X1 527 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 X6R8D5 127 aa7.95□□□□□ -1.14
BRCA1-226ENST00000591534 A0A1B0GUS0 222 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 A0A1W2PPL8 197 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 LRRC30A6NM36 301 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 PRR23D1E9PI22 279 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-226ENST00000591534 PTP4A3O75365 173 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 FADS2O95864 444 aaKnown RBP7.94□□□□□ -1.14
BRCA1-226ENST00000591534 IGHV2-70P01814 119 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
BRCA1-226ENST00000591534 TSPAN19P0C672 248 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 PRR23D2P0DMB1 279 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-226ENST00000591534 PIPP12273 146 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF12P17014 697 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 MYL12AP19105 171 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 CRABP1P29762 137 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 SDHAP31040 664 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 ATP6V1E1P36543 226 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 GPR4P46093 362 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 SLC6A9P48067 706 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 ISL1P61371 349 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 ACTC1P68032 377 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 ACTA1P68133 377 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 RAB40BQ12829 278 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 FHL1Q13642 323 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 C6orf141Q5SZD1 244 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 NXNL2Q5VZ03 156 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 C12orf73Q69YU5 71 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 SLC25A47Q6Q0C1 308 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 RFPL4BQ6ZWI9 263 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 HS3ST5Q8IZT8 346 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF283Q8N7M2 679 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 DEFB108BQ8NET1 73 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 OR52E2Q8NGJ4 325 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 OR5L1Q8NGL2 311 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 TMEM163Q8TC26 289 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 MBOAT4Q96T53 435 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 SLITRK2Q9H156 845 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 WNT5BQ9H1J7 359 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 IFT22Q9H7X7 185 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 SMURF1Q9HCE7 757 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 CMC2Q9NRP2 79 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
BRCA1-226ENST00000591534 WARS2Q9UGM6 360 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms