RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	ISX	Q2M1V0	245 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	DEFB134	Q4QY38	66 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	EIPR1	Q53HC9	387 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	WDR25	Q64LD2	544 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	TMEM225	Q6GV28	225 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	PLXDC2	Q6UX71	529 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	TMEM184A	Q6ZMB5	413 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF619	Q8N2I2	560 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	NECAP1	Q8NC96	275 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	AQP10	Q96PS8	301 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	MRI1	Q9BV20	369 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ENTPD2	Q9Y5L3	495 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	TRBV6-7	A0A0A0MS04	114 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	RAB27B	O00194	218 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF708	P17019	499 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	SLC6A9	P48067	706 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	CTXN1	P60606	82 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	SLC7A9	P82251	487 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	DUSP8	Q13202	625 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	FAM180A	Q6UWF9	173 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	MED25	Q71SY5	747 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	MRPL43	Q8N983	215 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	OR4K15	Q8NH41	348 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	WFDC1	Q9HC57	220 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	SAGE1	Q9NXZ1	904 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	SERTAD3	Q9UJW9	196 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	DHDH	Q9UQ10	334 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	YBX2	Q9Y2T7	364 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	PPIAL4A	Q9Y536	164 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	LIPG	Q9Y5X9	500 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	FAM221A	A4D161	298 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	MASP2	O00187	686 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ALOX5AP	P20292	161 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	FGF7	P21781	194 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	HMGN3	Q15651	99 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	C1QL4	Q86Z23	238 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	IRF7	Q92985	503 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	DIRC2	Q96SL1	478 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	FLVCR1	Q9Y5Y0	555 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347		A0A0B4J2E0	115 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347		A0A1B0GX12	115 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	C11orf98	E9PRG8	122 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	CST4	P01036	141 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	AMBP	P02760	352 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	HLA-G	P17693	338 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	CX3CR1	P49238	355 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	RAB4B	P61018	213 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	SUPT4H1	P63272	117 aa	Known RBP	13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	DMWD	Q09019	674 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	TEX38	Q6PEX7	206 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	ULK3	Q6PHR2	472 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	CYB561D1	Q8N8Q1	229 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZFP62	Q8NB50	900 aa	Predicted RBP	13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	STT3B	Q8TCJ2	826 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	MCHR2	Q969V1	340 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	C4orf45	Q96LM5	186 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	PPIL1	Q9Y3C6	166 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	INSL6	Q9Y581	213 aa		13.52	□□□□□ -0.24
CIRBP-228	ENST00000590347	ATG2B	Q96BY7	2078 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	PRSS8	Q16651	343 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	HIST2H3PS2	Q5TEC6	136 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	RTL6	Q6ICC9	239 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	TMEM156	Q8N614	296 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	POC1B	Q8TC44	478 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	MOGAT1	Q96PD6	335 aa		13.52	□□□□□ -0.25
CIRBP-228	ENST00000590347	DUXA	A6NLW8	204 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	DLEU1	O43261	78 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	MELTF	P08582	738 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	CEBPB	P17676	345 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	FUT3	P21217	361 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	GNAL	P38405	381 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	PRPS1	P60891	318 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	AWAT2	Q6E213	333 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	ST6GALNAC5	Q9BVH7	336 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	LMAN2L	Q9H0V9	348 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	SLC26A1	Q9H2B4	701 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	IL23A	Q9NPF7	189 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	SPHK2	Q9NRA0	654 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	SEMA5B	Q9P283	1151 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	SLC5A6	Q9Y289	635 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347		A0A1W2PP11	408 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	SCGN	O76038	276 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	NSA2	O95478	260 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	HSD11B2	P80365	405 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	GGTLC2	Q14390	218 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	ARHGAP11B	Q3KRB8	267 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	SP6	Q3SY56	376 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	PARS2	Q7L3T8	475 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	ADIPOR2	Q86V24	386 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	C7orf61	Q8IZ16	206 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	LRRC25	Q8N386	305 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	FAM210B	Q96KR6	192 aa		13.51	□□□□□ -0.25
CIRBP-228	ENST00000590347	ADAM10	O14672	748 aa		13.5	□□□□□ -0.25
CIRBP-228	ENST00000590347	DBI	P07108	87 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-228	ENST00000590347	SELE	P16581	610 aa		13.5	□□□□□ -0.25
CIRBP-228	ENST00000590347	OMG	P23515	440 aa		13.5	□□□□□ -0.25

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