RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
MBD1-220ENST00000589758 KIR2DS1A0A191URI9 304 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 PRR23D1E9PI22 279 aaPredicted RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 SPARCP09486 303 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 PRR23D2P0DMB1 279 aaPredicted RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 PAICSP22234 425 aaKnown RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 CA6P23280 308 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 ENTPD1P49961 510 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 NPY4RP50391 375 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 ESRRGP62508 458 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 ZNF92Q03936 586 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 MZT1Q08AG7 82 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 BAMBIQ13145 260 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 SNAPC1Q16533 368 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 PCK2Q16822 640 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 SNAI3Q3KNW1 292 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 KLHL12Q53G59 568 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 FAM201AQ5SY85 155 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 C9orf139Q6ZV77 190 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 CPOQ8IVL8 374 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 BCL6BQ8N143 479 aaPredicted RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 STMN2Q93045 179 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 NUDT16L1Q9BRJ7 211 aaKnown RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 COPS4Q9BT78 406 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 ADAT1Q9BUB4 502 aaKnown RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 OSBPL10Q9BXB5 764 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 NMNAT2Q9BZQ4 307 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 TRIM36Q9NQ86 728 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 UFSP2Q9NUQ7 469 aa11.99□□□□□ -0.49
MBD1-220ENST00000589758 MRPL15Q9P015 296 aaKnown RBP11.99□□□□□ -0.49
MBD1-220ENST00000589758 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 ZNF878C9JN71 531 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 M0R129 80 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 ZNF593O00488 134 aaPredicted RBP11.98□□□□□ -0.49
MBD1-220ENST00000589758 PHYHO14832 338 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 XRCC2O43543 280 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 PLATP00750 562 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 EPHA2P29317 976 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 DDOSTP39656 456 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 PSMB10P40306 273 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 SLC15A1P46059 708 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 MPPED2Q15777 294 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 GLYATL3Q5SZD4 288 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 PRAMEF6Q5VXH4 476 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 WDR25Q64LD2 544 aaPredicted RBP11.98□□□□□ -0.49
MBD1-220ENST00000589758 OR2AE1Q8NHA4 323 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 SLAMF6Q96DU3 332 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 RBM4BQ9BQ04 359 aaKnown RBP11.98□□□□□ -0.49
MBD1-220ENST00000589758 SP140LQ9H930 580 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 CENPMQ9NSP4 180 aa11.98□□□□□ -0.49
MBD1-220ENST00000589758 TRAV38-1A0A0B4J264 116 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 CLDN34H7C241 214 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 EI24O14681 340 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 NDUFA2O43678 99 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 ENSAO43768 121 aaKnown RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 RNASE1P07998 156 aaKnown RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 IGHV4-38-2P0DP08 117 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 PSKH1P11801 424 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 GSTT1P30711 240 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 POLR2IP36954 125 aaKnown RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 PRKXP51817 358 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 BPIFB3P59826 476 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 RPS7P62081 194 aaKnown RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 GRB2P62993 217 aaKnown RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 LINC01590Q5TEZ4 76 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 CD276Q5ZPR3 534 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 LYPD2Q6UXB3 125 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 ERI1Q8IV48 349 aaKnown RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 PQLC1Q8N2U9 271 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 BBS1Q8NFJ9 593 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 ZNF48Q96MX3 618 aaPredicted RBP11.97□□□□□ -0.49
MBD1-220ENST00000589758 TOR3AQ9H497 397 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 C14orf119Q9NWQ9 140 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 ERVK-18Q9QC07 812 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 ENOPH1Q9UHY7 261 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 DOCK11Q5JSL3 2073 aa11.97□□□□□ -0.49
MBD1-220ENST00000589758 ZAR1LA6NP61 321 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 LGALS8O00214 317 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 SPRY1O43609 319 aaPredicted RBP11.96□□□□□ -0.49
MBD1-220ENST00000589758 PRKYO43930 277 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 GLCEO94923 617 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 APOC1P02654 83 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 LIPFP07098 398 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 APOFQ13790 326 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 ZIK1Q3SY52 487 aaPredicted RBP11.96□□□□□ -0.49
MBD1-220ENST00000589758 SLX4IPQ5VYV7 408 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 ZNF841Q6ZN19 808 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 SPATC1Q76KD6 591 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 RHOUQ7L0Q8 258 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 CBR4Q8N4T8 237 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 C19orf18Q8NEA5 215 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 OR6N2Q8NGY6 317 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 SPSB4Q96A44 273 aa11.96□□□□□ -0.49
MBD1-220ENST00000589758 C1orf147Q96MC9 270 aaPredicted RBP11.96□□□□□ -0.49
MBD1-220ENST00000589758 DUX5Q96PT3 197 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms