RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TEX30Q5JUR7 227 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 ATPAF1Q5TC12 328 aaPredicted RBP11.51□□□□□ -0.57
VMP1-209ENST00000588915 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
VMP1-209ENST00000588915 C1orf122Q6ZSJ8 110 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 ZDHHC21Q8IVQ6 265 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 C11orf53Q8IXP5 236 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 PROKR2Q8NFJ6 384 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 OR8S1Q8NH09 359 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 OR5R1Q8NH85 324 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 GNPDA2Q8TDQ7 276 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 ST8SIA4Q92187 359 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 MCUR1Q96AQ8 359 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 NSRP1Q9H0G5 558 aaKnown RBP11.51□□□□□ -0.57
VMP1-209ENST00000588915 DNTTIP1Q9H147 329 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 SPAG4Q9NPE6 437 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 ZNRD1Q9P1U0 126 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 PRPF19Q9UMS4 504 aaKnown RBP11.51□□□□□ -0.57
VMP1-209ENST00000588915 ZNF281Q9Y2X9 895 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 APOC1P02654 83 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 CFL1P23528 166 aaKnown RBP11.5□□□□□ -0.57
VMP1-209ENST00000588915 SLC15A1P46059 708 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 TGM4P49221 684 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 PRKXP51817 358 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 BLVRAP53004 296 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 SPIBQ01892 262 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 TAF13Q15543 124 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 SLC35F1Q5T1Q4 408 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 DPY19L4Q7Z388 723 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 DCXRQ7Z4W1 244 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 LINC00471Q8N535 108 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 FAM86B1Q8N7N1 296 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 CYB561A3Q8NBI2 242 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 OR52L1Q8NGH7 329 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 CCL13Q99616 98 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 COPS4Q9BT78 406 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 FN3KQ9H479 309 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 IL20Q9NYY1 176 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 FBLN5Q9UBX5 448 aa11.5□□□□□ -0.57
VMP1-209ENST00000588915 ZNF878C9JN71 531 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 NDUFB3O43676 98 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 SASH3O75995 380 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 FMO3P31513 532 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 PYCR1P32322 319 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 ENTPD1P49961 510 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 HMGA2P52926 109 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 GRB2P62993 217 aaKnown RBP11.49□□□□□ -0.57
VMP1-209ENST00000588915 FAM3AP98173 230 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 DBPQ10586 325 aaPredicted RBP11.49□□□□□ -0.57
VMP1-209ENST00000588915 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 LRRC10Q5BKY1 277 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 WDR38Q5JTN6 314 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 C11orf88Q6PI97 169 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 WDR82Q6UXN9 313 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 OR1M1Q8NGA1 313 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 SLAMF6Q96DU3 332 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 DCTN5Q9BTE1 182 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 IL1RAPQ9NPH3 570 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 CENPMQ9NSP4 180 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 ONECUT1Q9UBC0 465 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 MAGEL2Q9UJ55 1249 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 CDH10Q9Y6N8 788 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 COMMD3-BMI1R4GMX3 469 aa11.49□□□□□ -0.57
VMP1-209ENST00000588915 IGHV3OR15-7A0A075B7D8 119 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 ZNF816-ZNF321PA0A0X1KG74 233 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 RNASEK-C17orf49H0YIS7 233 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.48□□□□□ -0.57
VMP1-209ENST00000588915 ZNF593O00488 134 aaPredicted RBP11.48□□□□□ -0.57
VMP1-209ENST00000588915 KRT36O76013 467 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 TSPAN15O95858 294 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 CSF1P09603 554 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 PRDX6P30041 224 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 RPS27P42677 84 aaKnown RBP11.48□□□□□ -0.57
VMP1-209ENST00000588915 UBE2E1P51965 193 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 ACSM1Q08AH1 577 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 POU4F2Q12837 409 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 PGBD2Q6P3X8 592 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 SLC16A9Q7RTY1 509 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 WDR86Q86TI4 376 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 PDZD9Q8IXQ8 264 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 FTMTQ8N4E7 242 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 DTX3Q8N9I9 347 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 CSNK2A3Q8NEV1 391 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 OR52H1Q8NGJ2 320 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 OR10Z1Q8NGY1 313 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 SGK3Q96BR1 496 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 TLNRD1Q9H1K6 362 aa11.48□□□□□ -0.57
VMP1-209ENST00000588915 M0R1W7 72 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 NPFFO15130 113 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 PAHP00439 452 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 FABP3P05413 133 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 HSD17B1P14061 328 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 ANOS1P23352 680 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 RRM2P31350 389 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 SLC25A1P53007 311 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms