RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 GSK3AP49840 483 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 PRSS12P56730 875 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 FAM166AQ6J272 317 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 RFPL4BQ6ZWI9 263 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 OR5AS1Q8N127 324 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 NKAIN3Q8N8D7 197 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 TRMT10AQ8TBZ6 339 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 REPIN1Q9BWE0 567 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 WDR12Q9GZL7 423 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 ELOVL5Q9NYP7 299 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 SULT1B1O43704 296 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 BDKRB2P30411 391 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 MRPL49Q13405 166 aaKnown RBP22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 GK2Q14410 553 aaPredicted RBP22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 ZNF846Q147U1 533 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 OR5H6Q8NGV6 325 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 PP6455Q8WZ26 134 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 CHST5Q9GZS9 411 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 POFUT1Q9H488 388 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 TMEM138Q9NPI0 162 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 IGKV1-9A0A0C4DH69 117 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 MAP2K3P46734 347 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 CLDN12P56749 244 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 GLT8D1Q68CQ7 371 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 UTS2BQ765I0 119 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 STEAP2Q8NFT2 490 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 CEP19Q96LK0 163 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 LIN7BQ9HAP6 207 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 RHBDD3Q9Y3P4 386 aa22.48■■□□□ 1.19
SCAMP4-210ENST00000588555 J3QRK9 145 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 J3QW42 95 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 SLC17A2O00624 439 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 RIPPLY1Q0D2K3 151 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 OR52N4Q8NGI2 321 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 NKX3-1Q99801 234 aaPredicted RBP22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 ACTR6Q9GZN1 396 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 PLGRKTQ9HBL7 147 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 CDH20Q9HBT6 801 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 STEAP1Q9UHE8 339 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 SPATA2Q9UM82 520 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 MYO7BQ6PIF6 2116 aa22.47■■□□□ 1.19
SCAMP4-210ENST00000588555 CCL21O00585 134 aa22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 CECR9P0C854 216 aa22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 MALLQ13021 153 aa22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 SPANXN2Q5MJ10 180 aa22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 LGALS14Q8TCE9 139 aa22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 CGGBP1Q9UFW8 167 aaPredicted RBP22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 V9GYH0 126 aa22.46■■□□□ 1.19
SCAMP4-210ENST00000588555 IGHV1-18A0A0C4DH31 117 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 SMPD2O60906 423 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 ALX3O95076 343 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 ZNF35P13682 527 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 ZNF45Q02386 682 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 TAB1Q15750 504 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 UBE2V2Q15819 145 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 ST3GAL2Q16842 350 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 SAMD12Q8N8I0 201 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 ZNF671Q8TAW3 534 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 SSC4DQ8WTU2 575 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 SLC25A28Q96A46 364 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 MOV10Q9HCE1 1003 aaKnown RBP22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 PTTG3PQ9NZH4 202 aa22.45■■□□□ 1.19
SCAMP4-210ENST00000588555 CALCBP10092 127 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 ELK1P19419 428 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 HLXQ14774 488 aaPredicted RBP22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 C1orf100Q5SVJ3 147 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 C1QTNF12Q5T7M4 302 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 TMEM42Q69YG0 159 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 MRI1Q9BV20 369 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 OPA3Q9H6K4 179 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 OR5V1Q9UGF6 321 aa22.45■■□□□ 1.18
SCAMP4-210ENST00000588555 EPG5Q9HCE0 2579 aa22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 CACNA1BQ00975 2339 aa22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 ERCC1P07992 297 aaPredicted RBP22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 EVX1P49640 407 aa22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 C22orf34Q6ZV56 151 aa22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 FOXRED1Q96CU9 486 aaPredicted RBP22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 DIRAS2Q96HU8 199 aa22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 OR51B6Q9H340 312 aa22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 METTL17Q9H7H0 456 aaPredicted RBP22.44■■□□□ 1.18
SCAMP4-210ENST00000588555 EIF4EP06730 217 aaKnown RBP22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 PPA1Q15181 289 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 SEZ6L2Q6UXD5 910 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 RNF144BQ7Z419 303 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 LRRC28Q86X40 367 aaPredicted RBP22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 JAGN1Q8N5M9 183 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 OR5L1Q8NGL2 311 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 OR6M1Q8NGM8 313 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 BORCS5Q969J3 196 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 NPAP1Q9NZP6 1156 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 EIF3KQ9UBQ5 218 aaKnown RBP22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 C16orf97H3BN30 126 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 ALDOBP05062 364 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 DCTN2Q13561 401 aaKnown RBP22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 RAB11BQ15907 218 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 C3orf36Q3SXR2 165 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 ZBTB37Q5TC79 503 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 CNIH2Q6PI25 160 aa22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 MRPL21Q7Z2W9 205 aaKnown RBP22.43■■□□□ 1.18
SCAMP4-210ENST00000588555 UBASH3BQ8TF42 649 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms