RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ZNF154Q13106 437 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 KCNJ8Q15842 424 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 LCN1P1Q5VSP4 162 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 BPIFB2Q8N4F0 458 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 DEFB108BQ8NET1 73 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 RGCCQ9H4X1 137 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 KRT84Q9NSB2 600 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 C1orf123Q9NWV4 160 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 LAMP5Q9UJQ1 280 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 INSIG2Q9Y5U4 225 aa16.38■□□□□ 0.21
TPM4-208ENST00000588410 FCGR1AP12314 374 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 FPR2P25090 351 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 GNALP38405 381 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 PTGES3Q15185 160 aaKnown RBP16.37■□□□□ 0.21
TPM4-208ENST00000588410 SNCBQ16143 134 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 ARMCX4Q5H9R4 360 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 BTNL3Q6UXE8 466 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 DCDC5Q6ZRR9 648 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 PRSS45Q7RTY3 260 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 KRT77Q7Z794 578 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 JMJD8Q96S16 334 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 SUCNR1Q9BXA5 334 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 NIPAL2Q9H841 368 aa16.37■□□□□ 0.21
TPM4-208ENST00000588410 MXRA5Q9NR99 2828 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 hCG_1807616A0A1W2PRN6 198 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 VENTXO95231 258 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 PTBP3O95758 552 aaKnown RBP16.36■□□□□ 0.21
TPM4-208ENST00000588410 SLC2A5P22732 501 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 PITPNBP48739 271 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 GSK3AP49840 483 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 OR8B8Q15620 311 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 LRRN1Q6UXK5 716 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 FTMTQ8N4E7 242 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 C19orf18Q8NEA5 215 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 CSNK2A3Q8NEV1 391 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 YIPF3Q9GZM5 350 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 TRIM36Q9NQ86 728 aa16.36■□□□□ 0.21
TPM4-208ENST00000588410 H2AFY2Q9P0M6 372 aaPredicted RBP16.36■□□□□ 0.21
TPM4-208ENST00000588410 hCG_38984A0A1B0GV85 526 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 LGALS8O00214 317 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 MRPL3P09001 348 aaKnown RBP16.35■□□□□ 0.21
TPM4-208ENST00000588410 KCTD18Q6PI47 426 aaPredicted RBP16.35■□□□□ 0.21
TPM4-208ENST00000588410 USP43Q70EL4 1123 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 TEAD3Q99594 435 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 SLC6A7Q99884 636 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 PAPOLGQ9BWT3 736 aaKnown RBP16.35■□□□□ 0.21
TPM4-208ENST00000588410 CLN8Q9UBY8 286 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 ENOPH1Q9UHY7 261 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 KLHDC2Q9Y2U9 406 aa16.35■□□□□ 0.21
TPM4-208ENST00000588410 TRAV38-1A0A0B4J264 116 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 C3orf80F5H4A9 247 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 MITFO75030 526 aaPredicted RBP16.34■□□□□ 0.21
TPM4-208ENST00000588410 ALOX5APP20292 161 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 CD80P33681 288 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 HCCSP53701 268 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 PSMA6P60900 246 aaKnown RBP16.34■□□□□ 0.21
TPM4-208ENST00000588410 SFRP4Q6FHJ7 346 aaPredicted RBP16.34■□□□□ 0.21
TPM4-208ENST00000588410 LYPD2Q6UXB3 125 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 AMIGO2Q86SJ2 522 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 ZFAND2BQ8WV99 257 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 RAB40AQ8WXH6 277 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 DUS3LQ96G46 650 aaKnown RBP16.34■□□□□ 0.21
TPM4-208ENST00000588410 ZNF319Q9P2F9 582 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 TMEM14AQ9Y6G1 99 aa16.34■□□□□ 0.21
TPM4-208ENST00000588410 ANXA2P2A6NMY6 339 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 TRIM77I1YAP6 450 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 PRKYO43930 277 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 FSHBP01225 129 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 HILS1P60008 231 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 IL5RAQ01344 420 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 RBMS3Q6XE24 437 aaKnown RBP16.33■□□□□ 0.2
TPM4-208ENST00000588410 ZNF826PQ6ZT77 177 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 SEMA6DQ8NFY4 1073 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 ASB17Q8WXJ9 295 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 C22orf15Q8WYQ4 148 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 LRTOMTQ8WZ04 291 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 CNN2Q99439 309 aaKnown RBP16.33■□□□□ 0.2
TPM4-208ENST00000588410 MICU1Q9BPX6 476 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 MROQ9BYG7 248 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 GABARAPL1Q9H0R8 117 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 ERVK-18Q9QC07 812 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 ZNF391Q9UJN7 358 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 NUP50Q9UKX7 468 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 RHBDD3Q9Y3P4 386 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 LRP12Q9Y561 859 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 TANC2Q9HCD6 1990 aa16.33■□□□□ 0.2
TPM4-208ENST00000588410 IGHV2-70DA0A0C4DH43 119 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 CCDC182A6NF36 153 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 OOEPA6NGQ2 149 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 PHYHO14832 338 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 NDUFA2O43678 99 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 DYSFO75923 2080 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 NPY4RP50391 375 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 PAX8Q06710 450 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 SLX4IPQ5VYV7 408 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 WDR25Q64LD2 544 aaPredicted RBP16.32■□□□□ 0.2
TPM4-208ENST00000588410 KDM4DQ6B0I6 523 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 DEGS2Q6QHC5 323 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 MEPCEQ7L2J0 689 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms