RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TGFBR2P37173 567 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 PSME3P61289 254 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 TSPAN31Q12999 210 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 MICBQ29980 383 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 FBLN7Q53RD9 439 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 ATPAF1Q5TC12 328 aaPredicted RBP11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L9Q6RFH8 374 aaPredicted RBP11.88□□□□□ -0.51
SDF2-202ENST00000585428 DCXRQ7Z4W1 244 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 WDR86Q86TI4 376 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 C1QL4Q86Z23 238 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 Q8N7P7 452 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 OR1M1Q8NGA1 313 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 OR56B2PQ8NGI1 322 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 FAM110DQ8TAY7 271 aaPredicted RBP11.88□□□□□ -0.51
SDF2-202ENST00000585428 GNPDA2Q8TDQ7 276 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 LRTOMTQ8WZ04 291 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 ST8SIA4Q92187 359 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 KCNJ15Q99712 375 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 NSRP1Q9H0G5 558 aaKnown RBP11.88□□□□□ -0.51
SDF2-202ENST00000585428 CCDC134Q9H6E4 229 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 OPA3Q9H6K4 179 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 hCG_1807616A0A1W2PRN6 198 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 A6NLC8 198 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 RNASEK-C17orf49H0YIS7 233 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 FBP1P09467 338 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 SLC2A1P11166 492 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 GRK5P34947 590 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 IFNGR2P38484 337 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 NUDT2P50583 147 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 PRKXP51817 358 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 HMGA2P52926 109 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 FAM3AP98173 230 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 WDR38Q5JTN6 314 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 SLC35E4Q6ICL7 350 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 C1orf122Q6ZSJ8 110 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 CYB561A3Q8NBI2 242 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 OR2T4Q8NH00 348 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 TNFRSF14Q92956 283 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 SEH1LQ96EE3 360 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 SEMA6AQ9H2E6 1030 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 IL20Q9NYY1 176 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 CD300AQ9UGN4 299 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 VPREB3Q9UKI3 123 aa11.87□□□□□ -0.51
SDF2-202ENST00000585428 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
SDF2-202ENST00000585428 ANKRD30BLA7E2S9 258 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 ZNF593O00488 134 aaPredicted RBP11.86□□□□□ -0.51
SDF2-202ENST00000585428 XRCC2O43543 280 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 SPIBQ01892 262 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 PGBD2Q6P3X8 592 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 SLC16A9Q7RTY1 509 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 PRSS45Q7RTY3 260 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 DPY19L4Q7Z388 723 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 ZDHHC21Q8IVQ6 265 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 LNX2Q8N448 690 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 PROKR2Q8NFJ6 384 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 OR51L1Q8NGJ5 315 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 LRRC29Q8WV35 223 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 C12orf43Q96C57 262 aaKnown RBP11.86□□□□□ -0.51
SDF2-202ENST00000585428 SLAMF6Q96DU3 332 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 COPS4Q9BT78 406 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 DCTN5Q9BTE1 182 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 TLNRD1Q9H1K6 362 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 EGLN3Q9H6Z9 239 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 PPP1R3EQ9H7J1 279 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 SPAG4Q9NPE6 437 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 IL1RAPQ9NPH3 570 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 CENPMQ9NSP4 180 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 FBLN5Q9UBX5 448 aa11.86□□□□□ -0.51
SDF2-202ENST00000585428 PRPF19Q9UMS4 504 aaKnown RBP11.86□□□□□ -0.51
SDF2-202ENST00000585428 ACOT8O14734 319 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 NPFFO15130 113 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 GMNNO75496 209 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 TIPRLO75663 272 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 RRM2P31350 389 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 DLX1P56177 255 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 EGR3Q06889 387 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 C2orf68Q2NKX9 166 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 DHRS7BQ6IAN0 325 aaPredicted RBP11.85□□□□□ -0.51
SDF2-202ENST00000585428 SLC36A1Q7Z2H8 476 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 CMTM4Q8IZR5 234 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 RNF148Q8N7C7 305 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 FAM216BQ8N7L0 139 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 ZNF511Q8NB15 262 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 SLC37A3Q8NCC5 494 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 OR8S1Q8NH09 359 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 CMTM5Q96DZ9 223 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 NMNAT2Q9BZQ4 307 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 SIRT7Q9NRC8 400 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 ZNF281Q9Y2X9 895 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 N6AMT1Q9Y5N5 214 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms