RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 CATP04040 527 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 KLK1P06870 262 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 SRMP19623 302 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 ME2P23368 584 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 MYCNOSP40205 109 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 NDUFA8P51970 172 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 SIGLEC14Q08ET2 396 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF816Q0VGE8 651 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 NAB1Q13506 487 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 YIF1BQ5BJH7 314 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 SAXO2Q658L1 398 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 ZFP1Q6P2D0 407 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 CD300LGQ6UXG3 332 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 SLC35D2Q76EJ3 337 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 NDUFAF7Q7L592 441 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 OR2W3Q7Z3T1 314 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 MDP1Q86V88 176 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF321PQ8N8H1 164 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 GATSQ8NAP1 163 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 GPR26Q8NDV2 337 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 TMEM104Q8NE00 496 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 ENKURQ8TC29 256 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 RXFP4Q8TDU9 374 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 C17orf50Q8WW18 174 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 SLC25A46Q96AG3 418 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 RBBP8Q99708 897 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 BCL7BQ9BQE9 202 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 GGTLC1Q9BX51 225 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 FGF23Q9GZV9 251 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 REEP1Q9H902 201 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 SLC38A10Q9HBR0 1119 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 GGA2Q9UJY4 613 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 PLA2R1Q13018 1463 aa2.19□□□□□ -2.06
SMCHD1-209ENST00000583441 NDUFC2-KCTD14E9PQ53 114 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 RRP8O43159 456 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 CTNSO60931 367 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 GATBO75879 557 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 RCBTB2O95199 551 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 MPZL1O95297 269 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 OXTP01178 125 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 MT-ND4P03905 459 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 IL4P05112 153 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 GZMAP12544 262 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 HOXB8P17481 243 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 TCP1P17987 556 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 APLNRP35414 380 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 CSKP41240 450 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 ATP6V0D1P61421 351 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 PITPNAQ00169 270 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 CYP24A1Q07973 514 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 RNASE13Q5GAN3 156 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 OR2T5Q6IEZ7 315 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 GUSBP11Q6P575 273 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 LINC00336Q6ZUF6 198 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 ERO1BQ86YB8 467 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 RAB43Q86YS6 212 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 SLC30A8Q8IWU4 369 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 KIF2BQ8N4N8 673 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 NECAP1Q8NC96 275 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 TTLQ8NG68 377 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 OR10Z1Q8NGY1 313 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 OR2T29Q8NH02 315 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 DYNLL2Q96FJ2 89 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 RNF5Q99942 180 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 KCNS3Q9BQ31 491 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 SULT4A1Q9BR01 284 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 TMEM243Q9BU79 118 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 CHCHD7Q9BUK0 85 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 ARMC7Q9H6L4 198 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 C8orf17Q9NRJ1 99 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF257Q9Y2Q1 563 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 OR51B2Q9Y5P1 312 aa2.18□□□□□ -2.06
SMCHD1-209ENST00000583441 MROH7Q68CQ1 1323 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 LRP4O75096 1905 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 IGHV3-72A0A0B4J1Y9 119 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 A0A1W2PPV4 95 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 OR5H1A6NKK0 313 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF850A8MQ14 1090 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 PLIN3O60664 434 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 SLC19A2O60779 497 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CCNKO75909 580 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 HSPD1P10809 573 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 GABRG2P18507 467 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CPN2P22792 545 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 TUBG1P23258 451 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CD70P32970 193 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 GGT2P36268 569 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 ARL2P36404 184 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 PSMC5P62195 406 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CDC20Q12834 499 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 OR1Q1Q15612 314 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 TSC22D1Q15714 1073 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CAVIN4Q5BKX8 364 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 TEX30Q5JUR7 227 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 MFSD14CQ5VZR4 134 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 NEGR1Q7Z3B1 354 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 LINC00469Q8N7U9 141 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 OR4M1Q8NGD0 313 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 OR6K6Q8NGW6 343 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 OR13G1Q8NGZ3 307 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms