RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AMDHD1Q96NU7 426 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 RBP7Q96R05 134 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SECISBP2Q96T21 854 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 TEAD3Q99594 435 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 AIF1LQ9BQI0 150 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF416Q9BWM5 594 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 REG4Q9BYZ8 158 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 PLA2G12AQ9BZM1 189 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 HDHD2Q9H0R4 259 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR52A5Q9H2C5 316 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 PPA2Q9H2U2 334 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 GLIPR2Q9H4G4 154 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZDHHC6Q9H6R6 413 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 EGLN3Q9H6Z9 239 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 CD84Q9UIB8 345 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 CES1P1Q9UKY3 287 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SPATA2Q9UM82 520 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 FOXA2Q9Y261 457 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MAB21L2Q9Y586 359 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 A0A0A6YYD5 115 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 ARPC4-TTLL3A0A0A6YYG9 625 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A0B4J203 849 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A1B0GWJ7 208 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 LRIT2A6NDA9 550 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TRABD2BA6NFA1 517 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 HMSDA8MTL9 139 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 SNRPGP15A8MWD9 76 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 A8MXK9 166 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 KRBOX1C9JBD0 128 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 MCRIP1C9JLW8 97 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 NEDD8-MDP1E9PL57 170 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 G3V3Q6 166 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 H0YIG0 161 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 SMLR1H3BR10 107 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 I3L521 148 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 SAP18O00422 153 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 BTN3A3O00478 584 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 BHLHE40O14503 412 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 EMC8O43402 210 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 NDUFA2O43678 99 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 LCMT2O60294 686 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 POP7O75817 140 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 GATBO75879 557 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 RCBTB2O95199 551 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 OR6A2O95222 327 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 WDPCPO95876 746 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 ECDO95905 644 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 IGHV3-13P01766 116 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CXCL10P02778 98 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 THY1P04216 161 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 IFNA16P05015 189 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 EIF4EP06730 217 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 GUSBP08236 651 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 IFI6P09912 130 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 SP9P0CG40 484 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CALCBP10092 127 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CPN1P15169 458 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CXCL3P19876 107 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 RAB3BP20337 219 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 PSMB1P20618 241 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 HNRNPA2B1P22626 353 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC2A5P22732 501 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 IL32P24001 234 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 GABRR2P28476 465 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 AKT2P31751 481 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 MPIP34949 423 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 PTGER4P35408 488 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TRIM23P36406 574 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CD79BP40259 229 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CCR8P51685 355 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CNN1P51911 297 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 MRPS10P82664 201 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 REEP5Q00765 189 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CSTF1Q05048 431 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 PRDX1Q06830 199 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TGM3Q08188 693 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 FUT5Q11128 374 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 EXOSC2Q13868 293 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 OPCMLQ14982 345 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 PGGHGQ32M88 737 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM52BQ4KMG9 183 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 ACSM3Q53FZ2 586 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 IDNKQ5T6J7 187 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 BCL2L15Q5TBC7 163 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 METTL11BQ5VVY1 283 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 RPL13AP3Q6NVV1 102 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 SFXN4Q6P4A7 337 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TNFAIP8L2Q6P589 184 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 WASH2PQ6VEQ5 465 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TFAP2EQ6VUC0 442 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF620Q6ZNG0 422 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 UTS2BQ765I0 119 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 Q7L0L9 218 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 CEACAM19Q7Z692 300 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 C17orf64Q86WR6 236 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 NUDT13Q86X67 352 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 COMMD2Q86X83 199 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM25Q86YD3 366 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF547Q8IVP9 402 aa3.27□□□□□ -1.89
SMCHD1-208ENST00000583344 NKAIN4Q8IVV8 208 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms