RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 M0R1X1 148 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 AP3B1O00203 1094 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC9A3R1O14745 358 aaPredicted RBP1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 RAD1O60671 282 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 FGFR1OPO95684 399 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 LSM8O95777 96 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 HPRT1P00492 218 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 PGA4P0DJD7 388 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 PGA3P0DJD8 388 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 PGA5P0DJD9 388 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 GGT2P36268 569 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 TGM4P49221 684 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 KRTAP12-1P59990 96 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 ACTR3P61158 418 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 IFITM3Q01628 133 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 Q6ZSR6 202 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 ORMDL3Q8N138 153 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 UBAC2Q8NBM4 344 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 BPIFCQ8NFQ6 507 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 OR52N1Q8NH53 320 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 AKR7LQ8NHP1 331 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC2A14Q8TDB8 520 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 ELMO1Q92556 727 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 IGF2BP2-AS1Q96M15 143 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF302Q9NR11 478 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 PTTG3PQ9NZH4 202 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 PITPNC1Q9UKF7 332 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 MCTS1Q9ULC4 181 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 IGLV10-54A0A075B6I4 117 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 TRBV9A0A0B4J1U6 114 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 HEATR9A2RTY3 570 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 AQP9O43315 295 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 OXTP01178 125 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 MMP7P09237 267 aaPredicted RBP1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 TROVE2P10155 538 aaKnown RBP eCLIP1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 PBLDP30039 288 aaPredicted RBP1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 PFN2P35080 140 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 NAB1Q13506 487 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF141Q15928 474 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 XKR7Q5GH72 579 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 CPTPQ5TA50 214 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF660Q6AZW8 331 aaPredicted RBP1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 NANOGNBQ7Z5D8 188 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 BBS7Q8IWZ6 715 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC25A29Q8N8R3 303 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 OR4C13Q8NGP0 309 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 MUC7Q8TAX7 377 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 DCAKDQ8WVC6 231 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 OR2V2Q96R30 315 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 PDCD1LG2Q9BQ51 273 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 UQCC2Q9BRT2 126 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 DSN1Q9H410 356 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 PIGUQ9H490 435 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 PLEKHF2Q9H8W4 249 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 NLE1Q9NVX2 485 aaPredicted RBP1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 EXTL2Q9UBQ6 330 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 CLN8Q9UBY8 286 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 HMGXB4Q9UGU5 601 aa1.1□□□□□ -2.23
SMCHD1-206ENST00000581631 COL22A1Q8NFW1 1626 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 GOLGA6L4A6NEF3 574 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 NME4O00746 187 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 DNALI1O14645 258 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 IGHV1-46P01743 117 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 MAS1P04201 325 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 EIF2S2P20042 333 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 RAB4AP20338 218 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 MYL9P24844 172 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 PPICP45877 212 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 LIPEQ05469 1076 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF678Q5SXM1 525 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF470Q6ECI4 717 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 TTC23LQ6PF05 361 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 TMPRSS11AQ6ZMR5 421 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 Q6ZS52 159 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 HORMAD1Q86X24 394 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 ACTL9Q8TC94 416 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 SGTBQ96EQ0 304 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 CSPG4P5Q96PW8 444 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 PANX1Q96RD7 426 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 PKIBQ9C010 78 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 ACTR3CQ9C0K3 210 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 TMEM165Q9HC07 324 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 MRM3Q9HC36 420 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 RBFOX1Q9NWB1 397 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 RAB23Q9ULC3 237 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 KIAA1671Q9BY89 1806 aa1.09□□□□□ -2.23
SMCHD1-206ENST00000581631 ISPDA4D126 451 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 C15orf65H3BRN8 121 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 TEX46H3BTG2 121 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 H7C0C1 242 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 M0R3G1 203 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 LSM1O15116 133 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 RNF13O43567 381 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 NRASP01111 189 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 HRASP01112 189 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 KRASP01116 189 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 HBE1P02100 147 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 BCKDHBP21953 392 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 MPIP34949 423 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 APLNRP35414 380 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms