RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GRB2P62993 217 aaKnown RBP16.34■□□□□ 0.21
LIMD2-209ENST00000580222 IL13RA1P78552 427 aa16.34■□□□□ 0.21
LIMD2-209ENST00000580222 C6orf141Q5SZD1 244 aa16.34■□□□□ 0.21
LIMD2-209ENST00000580222 ZNF322Q6U7Q0 402 aaPredicted RBP16.34■□□□□ 0.21
LIMD2-209ENST00000580222 LRRN1Q6UXK5 716 aa16.34■□□□□ 0.21
LIMD2-209ENST00000580222 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.34■□□□□ 0.21
LIMD2-209ENST00000580222 PAQR4Q8N4S7 273 aaPredicted RBP16.34■□□□□ 0.21
LIMD2-209ENST00000580222 OR52I1Q8NGK6 324 aa16.34■□□□□ 0.21
LIMD2-209ENST00000580222 OR51B6Q9H340 312 aa16.34■□□□□ 0.21
LIMD2-209ENST00000580222 A0A1W2PQL4 384 aaPredicted RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 DAPL1A0PJW8 107 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 F5H5K5 113 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 PSMD9O00233 223 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 SLC1A7O00341 560 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 DENRO43583 198 aaKnown RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 ABHD16AO95870 558 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 OMGP23515 440 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 TPTEP56180 551 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 KLF17Q5JT82 389 aaPredicted RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 ARL9Q6T311 187 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF283Q8N7M2 679 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 DCLRE1CQ96SD1 692 aaKnown RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 KCNJ15Q99712 375 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 PLCXD1Q9NUJ7 323 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 MRPS18AQ9NVS2 196 aaKnown RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 SCN3BQ9NY72 215 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 EIF3KQ9UBQ5 218 aaKnown RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 MYRFQ9Y2G1 1151 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 SOX21Q9Y651 276 aaPredicted RBP16.33■□□□□ 0.2
LIMD2-209ENST00000580222 CACNG2Q9Y698 323 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 WNK2Q9Y3S1 2297 aa16.33■□□□□ 0.2
LIMD2-209ENST00000580222 EFCAB10A6NFE3 127 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 M0R135 149 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 RNASE1P07998 156 aaKnown RBP16.32■□□□□ 0.2
LIMD2-209ENST00000580222 FAM157BP0CG42 384 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 PIPP12273 146 aaPredicted RBP16.32■□□□□ 0.2
LIMD2-209ENST00000580222 GLRXP35754 106 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 OPRL1P41146 370 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 SLC6A9P48067 706 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 PRKXP51817 358 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 BAMBIQ13145 260 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 MED21Q13503 144 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 RBMS3Q6XE24 437 aaKnown RBP16.32■□□□□ 0.2
LIMD2-209ENST00000580222 AHSA2Q719I0 299 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 RHOUQ7L0Q8 258 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 SSX6Q7RTT6 188 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 ACBD7Q8N6N7 88 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 GGHQ92820 318 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF799Q96GE5 643 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 C4orf45Q96LM5 186 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 OR8B4Q96RC9 309 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 MROQ9BYG7 248 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 ELOVL3Q9HB03 270 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 SLCO1C1Q9NYB5 712 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 CNOT2Q9NZN8 540 aaKnown RBP16.32■□□□□ 0.2
LIMD2-209ENST00000580222 DUSP13Q9UII6 198 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 LRP12Q9Y561 859 aa16.32■□□□□ 0.2
LIMD2-209ENST00000580222 ARHGAP32A7KAX9 2087 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 PRR32B1ATL7 298 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 J3QRE1 110 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 IGHA1P01876 353 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 KRT8P05787 483 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 ACSM4P0C7M7 580 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 WNT5AP41221 380 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 RIDAP52758 137 aaKnown RBP16.31■□□□□ 0.2
LIMD2-209ENST00000580222 CSNK2BP67870 215 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 CCL8P80075 99 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 LCN2P80188 198 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF85Q03923 595 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 EGR3Q06889 387 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 UNQ6126/PRO20091Q6UXV3 157 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 FAM220AQ7Z4H9 259 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 C1QL4Q86Z23 238 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF679Q8IYX0 411 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 ABHD4Q8TB40 342 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 SNX33Q8WV41 574 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 IPCEF1Q8WWN9 437 aaPredicted RBP16.31■□□□□ 0.2
LIMD2-209ENST00000580222 MRPL48Q96GC5 212 aaKnown RBP16.31■□□□□ 0.2
LIMD2-209ENST00000580222 NIPAL2Q9H841 368 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 FGF20Q9NP95 211 aaPredicted RBP16.31■□□□□ 0.2
LIMD2-209ENST00000580222 INPP5EQ9NRR6 644 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 PSORS1C1Q9UIG5 152 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 TPRKBQ9Y3C4 175 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 WIPI2Q9Y4P8 454 aa16.31■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF254O75437 659 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 CLPTM1O96005 669 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 APOC1P02654 83 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 LCKP06239 509 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 CCDC159P0C7I6 412 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 DCKP27707 260 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 GCH1P30793 250 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 OTX1P32242 354 aaPredicted RBP16.3■□□□□ 0.2
LIMD2-209ENST00000580222 RAD52P43351 418 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 CX3CR1P49238 355 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 RGS6P49758 472 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 RPS23P62266 143 aaKnown RBP16.3■□□□□ 0.2
LIMD2-209ENST00000580222 ROM1Q03395 351 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 HNRNPA0Q13151 305 aaKnown RBP16.3■□□□□ 0.2
LIMD2-209ENST00000580222 SLC9A3R2Q15599 337 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 KRTAP27-1Q3LI81 207 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms