RNA–Protein interactions for RNA: ENST00000580003.1

SS18-214, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 609 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-214ENST00000580003 TMEM69Q5SWH9 247 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 CARD17Q5XLA6 110 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 DAZ4Q86SG3 579 aaKnown RBP2.64□□□□□ -1.99
SS18-214ENST00000580003 SLC26A10Q8NG04 563 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 PHOSPHO2Q8TCD6 241 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 DCAKDQ8WVC6 231 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 ZNF160Q9HCG1 818 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 DAZ1Q9NQZ3 744 aaKnown RBP2.64□□□□□ -1.99
SS18-214ENST00000580003 DYRK4Q9NR20 520 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 LYARQ9NX58 379 aaKnown RBP2.64□□□□□ -1.99
SS18-214ENST00000580003 DCAF16Q9NXF7 216 aa2.64□□□□□ -1.99
SS18-214ENST00000580003 ZNF407Q9C0G0 2248 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 C17orf51A8MQB3 221 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 C4orf51C9J302 202 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 M0R1X1 148 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 HRES1P13985 223 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 HLA-DMAP28067 261 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 BMI1P35226 326 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 GGT2P36268 569 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 C21orf59P57076 290 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 ELF3P78545 371 aaPredicted RBP2.63□□□□□ -1.99
SS18-214ENST00000580003 SP6Q3SY56 376 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 SMARCD3Q6STE5 483 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 C8orf44Q96CB5 159 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 SGTBQ96EQ0 304 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 ACP6Q9NPH0 428 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 COMMD3-BMI1R4GMX3 469 aa2.63□□□□□ -1.99
SS18-214ENST00000580003 NINLQ9Y2I6 1382 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 A8MWL6 223 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 OR2F2O95006 317 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 CD160O95971 181 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 KRT14P02533 472 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 NELFEP18615 380 aaKnown RBP2.62□□□□□ -1.99
SS18-214ENST00000580003 APLNRP35414 380 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 PPICP45877 212 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 UQCRFS1P47985 274 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 FABP6P51161 128 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 KDSRQ06136 332 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 LRRC66Q68CR7 880 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 APOBEC3HQ6NTF7 200 aaKnown RBP2.62□□□□□ -1.99
SS18-214ENST00000580003 CDH26Q8IXH8 852 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 DRAM1Q8N682 238 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 OR10W1Q8NGF6 305 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 RPEQ96AT9 228 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 PRRC1Q96M27 445 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 GSDMAQ96QA5 445 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 TEAD3Q99594 435 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 UQCC2Q9BRT2 126 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 CALN1Q9BXU9 219 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 UCK2Q9BZX2 261 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 CLN8Q9UBY8 286 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 HMGXB4Q9UGU5 601 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 RWDD2AQ9UIY3 292 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 ZSWIM8A7E2V4 1837 aa2.62□□□□□ -1.99
SS18-214ENST00000580003 TSPAN11A1L157 253 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 ISPDA4D126 451 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 GOLGA6L4A6NEF3 574 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 OR2AG2A6NM03 316 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 CLTAP09496 248 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 ALKBH6Q3KRA9 238 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 MFSD14CQ5VZR4 134 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 ORMDL3Q8N138 153 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 OR52N1Q8NH53 320 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 FAM81AQ8TBF8 368 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 EMC6Q9BV81 110 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 SLC7A5P2Q9GIP4 190 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 BAZ2AQ9UIF9 1905 aaKnown RBP2.61□□□□□ -1.99
SS18-214ENST00000580003 UBN2Q6ZU65 1347 aa2.61□□□□□ -1.99
SS18-214ENST00000580003 THADAQ6YHU6 1953 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 CLDN34H7C241 214 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 DNALI1O14645 258 aaPredicted RBP2.6□□□□□ -1.99
SS18-214ENST00000580003 MAS1P04201 325 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 TCP1P17987 556 aaKnown RBP2.6□□□□□ -1.99
SS18-214ENST00000580003 HMOX2P30519 316 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 MPIP34949 423 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 MYCNOSP40205 109 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 RFC3P40938 356 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 HMGN5P82970 282 aaKnown RBP2.6□□□□□ -1.99
SS18-214ENST00000580003 MEF2CQ06413 473 aaPredicted RBP2.6□□□□□ -1.99
SS18-214ENST00000580003 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 LINC00469Q8N7U9 141 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 OR4M2Q8NGB6 313 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 TMEM185BQ9H7F4 350 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
SS18-214ENST00000580003 ANKRD65E5RJM6 399 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.59□□□□□ -1.99
SS18-214ENST00000580003 SLC16A7O60669 478 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 IGLV2-8P01709 118 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 CTRB1P17538 263 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 TGFBR2P37173 567 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 GZMMP51124 257 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 SCD5Q86SK9 330 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 JAGN1Q8N5M9 183 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 SLC25A29Q8N8R3 303 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 CMTM2Q8TAZ6 248 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 DYNLL2Q96FJ2 89 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 PKMYT1Q99640 499 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 GPR21Q99679 349 aa2.59□□□□□ -1.99
SS18-214ENST00000580003 PDCD1LG2Q9BQ51 273 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms