RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 AMBNQ9NP70 447 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CCNB1IP1Q9NPC3 277 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 NGBQ9NPG2 151 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ACOXLQ9NUZ1 547 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 CISD1Q9NZ45 108 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 NUFIP1Q9UHK0 495 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 RAB26Q9ULW5 256 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 DIMT1Q9UNQ2 313 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 ORC6Q9Y5N6 252 aa3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 SIRT4Q9Y6E7 314 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 TEP1Q99973 2627 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-215ENST00000578995 A0A0U1RQV5 110 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 IQCMA0A1B0GVH7 501 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TRIM64CA6NLI5 447 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR4C45A6NMZ5 311 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 IQCF6A8MYZ5 107 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 VWC2LB2RUY7 222 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 H0YHG0 523 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CASKO14936 926 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 LMX1BO60663 402 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TMCC2O75069 709 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF254O75437 659 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RP2O75695 350 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SULT1C4O75897 302 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF205O95201 554 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 PTHP01270 115 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV1-46P01743 117 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV4-39P01824 125 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 HLA-DQA2P01906 255 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RAF1P04049 648 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CDK1P06493 297 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CD55P08174 381 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CCDC159P0C7I6 412 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SLC2A1P11166 492 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF823P16415 610 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TUBG1P23258 451 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 C21orf33P30042 268 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 APLNRP35414 380 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SERPINF1P36955 418 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RBMXP38159 391 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CX3CR1P49238 355 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RGS6P49758 472 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 PPOXP50336 477 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 GDI2P50395 445 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 PRKXP51817 358 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR12D2P58182 307 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RPS7P62081 194 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RPS11P62280 158 aaKnown RBP eCLIP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 GRB2P62993 217 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM3AP98173 230 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 IL5RAQ01344 420 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 GALEQ14376 348 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 HLXQ14774 488 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TP53I3Q53FA7 332 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 WDR38Q5JTN6 314 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SPATA46Q5T0L3 261 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR2G6Q5TZ20 316 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 LIPNQ5VXI9 398 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM42Q69YG0 159 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM154Q6P9G4 183 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SPATC1Q76KD6 591 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 WDR86Q86TI4 376 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM200AQ86VY9 491 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CATSPERDQ86XM0 798 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TGIF2LYQ8IUE0 185 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 EGFL6Q8IUX8 553 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ELMOD2Q8IZ81 293 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 C8orf59Q8N0T1 100 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 LRRC75A-AS1Q8N1F1 130 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ZCCHC24Q8N2G6 241 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SYS1Q8N2H4 156 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 MUC15Q8N387 334 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ACBD7Q8N6N7 88 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SETD9Q8NE22 299 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF555Q8NEP9 628 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR10H5Q8NGA6 315 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR1J2Q8NGS2 313 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR1J1Q8NGS3 322 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR2AJ1Q8NGZ0 328 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR10AC1Q8NH08 325 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ASB17Q8WXJ9 295 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RFKQ969G6 155 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 APOBEC3DQ96AK3 386 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OTULINQ96BN8 352 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 HAVCR1Q96D42 359 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 PGLYRP3Q96LB9 341 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TBX5Q99593 518 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SYT3Q9BQG1 590 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 SLC30A2Q9BRI3 323 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CDCA4Q9BXL8 241 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 BCL2L14Q9BZR8 327 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 KCNN2Q9H2S1 579 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 OR51B6Q9H340 312 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 NIPAL2Q9H841 368 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 RNF121Q9H920 327 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 UBTD1Q9HAC8 227 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 ELOVL3Q9HB03 270 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 CDH20Q9HBT6 801 aa3.21□□□□□ -1.9
SMARCE1-215ENST00000578995 TUBG2Q9NRH3 451 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms