RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 OR5L1Q8NGL2 311 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 SNIP1Q8TAD8 396 aaKnown RBP9.73□□□□□ -0.85
SKA2-204ENST00000578519 GPX8Q8TED1 209 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 SGK3Q96BR1 496 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 POM121Q96HA1 1249 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 DLL3Q9NYJ7 618 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 SCP2D1Q9UJQ7 156 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 ING4Q9UNL4 249 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 PCNX2A6NKB5 2137 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 FREM3P0C091 2139 aa9.73□□□□□ -0.85
SKA2-204ENST00000578519 OR14I1A6ND48 311 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 TMEM14DPA8MWL7 114 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 H3BUI4 141 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 LMX1BO60663 402 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 PEX14O75381 377 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 CRYABP02511 175 aaKnown RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 MELTFP08582 738 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 MMP7P09237 267 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 NTF4P34130 210 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 APLNRP35414 380 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 PTGFRP43088 359 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 OR3A2P47893 321 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 EFNB2P52799 333 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 FAPQ12884 760 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 CAMK2BQ13554 666 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 ZNF169Q14929 603 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 ZMYND11Q15326 602 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 RBMS2Q15434 407 aaKnown RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 KISS1Q15726 138 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 CDNFQ49AH0 187 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 ACTBL2Q562R1 376 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 PABPC1L2AQ5JQF8 200 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 CD276Q5ZPR3 534 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 STEAP1BQ6NZ63 245 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 IGFL3Q6UXB1 125 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 ZBTB8BQ8NAP8 495 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 OR10R2Q8NGX6 335 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 OR6F1Q8NGZ6 308 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 AKR7LQ8NHP1 331 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 CCDC107Q8WV48 283 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 APOBEC3DQ96AK3 386 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 UPRTQ96BW1 309 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 ZNF837Q96EG3 531 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 BORCS8Q96FH0 119 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 TRAF4Q9BUZ4 470 aaPredicted RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 C1QTNF5Q9BXJ0 243 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 TMEM59Q9BXS4 323 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 METTL9Q9H1A3 318 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 IFT46Q9NQC8 304 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 ZNF319Q9P2F9 582 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 KLK11Q9UBX7 282 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 KCNN3Q9UGI6 736 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 PAIP2BQ9ULR5 123 aaKnown RBP9.72□□□□□ -0.85
SKA2-204ENST00000578519 PLEKHA6Q9Y2H5 1048 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 KCNMB2Q9Y691 235 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 PCSK5Q92824 1860 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 EML6Q6ZMW3 1958 aa9.72□□□□□ -0.85
SKA2-204ENST00000578519 TRAV6A0A075B6T7 132 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 ZNF816-ZNF321PA0A0X1KG74 233 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 UBE2QL1A1L167 161 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 C7orf66A4D0T2 115 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 J3QW42 95 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 SS18L1O75177 396 aaPredicted RBP9.71□□□□□ -0.86
SKA2-204ENST00000578519 CRTAPO75718 401 aaPredicted RBP9.71□□□□□ -0.86
SKA2-204ENST00000578519 NDUFB6O95139 128 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 RAB3DO95716 219 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 MPIG6BO95866 241 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 TGM6O95932 706 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 NRASP01111 189 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 CSTBP04080 98 aaKnown RBP9.71□□□□□ -0.86
SKA2-204ENST00000578519 IL5P05113 134 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 VSIG8P0DPA2 414 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 CD79AP11912 226 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 FUT6P51993 359 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 GNG2P59768 71 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 RAB1AP62820 205 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
SKA2-204ENST00000578519 EIF2S3LQ2VIR3 472 aaKnown RBP9.71□□□□□ -0.86
SKA2-204ENST00000578519 SFRP4Q6FHJ7 346 aaPredicted RBP9.71□□□□□ -0.86
SKA2-204ENST00000578519 UNQ6126/PRO20091Q6UXV3 157 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 TCTE3Q8IZS6 198 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 CSNK2A3Q8NEV1 391 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 TNFAIP8L1Q8WVP5 186 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 WNT2BQ93097 391 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 SEH1LQ96EE3 360 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 LYZL4Q96KX0 146 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 HIST1H2AAQ96QV6 131 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 C20orf85Q9H1P6 137 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 OR51J1Q9H342 316 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 NOX3Q9HBY0 568 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 PTTG3PQ9NZH4 202 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 PRUNE2Q8WUY3 3088 aa9.71□□□□□ -0.86
SKA2-204ENST00000578519 EYSQ5T1H1 3165 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 A0A1B0GUH1 482 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 SNRPGP15A8MWD9 76 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 ZNF736B4DX44 427 aaPredicted RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms