RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SLC25A31Q9H0C2 315 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 ARG1P05089 322 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 GDF1P27539 372 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 RAB5CP51148 216 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 SLC37A1P57057 533 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 CST9LP1Q5W188 147 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 OR8G2PQ6IF36 304 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 NECAP1Q8NC96 275 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 GJC3Q8NFK1 279 aa16.04■□□□□ 0.16
ATPAF1-214ENST00000576409 IGHV5-51A0A0C4DH38 117 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM229AB2RXF0 380 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SERPINA7P05543 415 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 ADIRFQ15847 76 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SSX2Q16385 188 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 RPUSD3Q6P087 351 aaKnown RBP16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 MRPL41Q8IXM3 137 aaKnown RBP16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 LGI3Q8N145 548 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 RNF128Q8TEB7 428 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 AMELYQ99218 206 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 GCM1Q9NP62 436 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 GNG13Q9P2W3 67 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 GAB2Q9UQC2 676 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 HMSDA8MTL9 139 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 TSTD3H0UI37 97 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 EPPINO95925 133 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 ABCD3P28288 659 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 NKX2-1P43699 371 aaPredicted RBP16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM268Q5VZI3 342 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM104Q8NE00 496 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 ANKRD9Q96BM1 317 aaPredicted RBP16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SGK3Q96BR1 496 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SEH1LQ96EE3 360 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 MYO16Q9Y6X6 1858 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 TRAPPC2LH3BP13 241 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SIGLEC6O43699 453 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SSX9Q7RTT3 188 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 YRDCQ86U90 279 aaKnown RBP16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 MITD1Q8WV92 249 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 SLC25A38Q96DW6 304 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 UBL7Q96S82 380 aaPredicted RBP16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 NDRG3Q9UGV2 375 aa16.03■□□□□ 0.16
ATPAF1-214ENST00000576409 A0A1B0GX78 115 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 SHOXO15266 292 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 HPNP05981 417 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 CPN1P15169 458 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM164Q5U3C3 297 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 RDH5Q92781 318 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 GFOD1Q9NXC2 390 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 ABCA7Q8IZY2 2146 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 MEX3AA1L020 520 aaKnown RBP16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 CEBPZOSA8MTT3 80 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 OR2J2O76002 312 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 HLA-HP01893 362 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 MLF1P58340 268 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 MIDNQ504T8 468 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 SLC38A9Q8NBW4 561 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 OR5M8Q8NGP6 311 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 PHOSPHO2Q8TCD6 241 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 PLK3Q9H4B4 646 aa16.02■□□□□ 0.16
ATPAF1-214ENST00000576409 TMEM218A2RU14 115 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 M0R135 149 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 GSTZ1O43708 216 aaPredicted RBP16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 IGKV1D-16P01601 117 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 ENPP1P22413 925 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 ACAA2P42765 397 aaKnown RBP16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 SLC25A1P53007 311 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 TMEM255AQ5JRV8 349 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF813Q6ZN06 617 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 STPG2Q8N412 459 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF799Q96GE5 643 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 WASF3Q9UPY6 502 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 HEATR5BQ9P2D3 2071 aa16.02■□□□□ 0.15
ATPAF1-214ENST00000576409 ADAM10O14672 748 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 HS3ST1O14792 307 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 SSSCA1O60232 199 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 H2BFSP57053 126 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 FABP9Q0Z7S8 132 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 TSPO2Q5TGU0 170 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 C19orf48Q6RUI8 117 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 HSD17B13Q7Z5P4 300 aaPredicted RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 MISPQ8IVT2 679 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 IL22RA1Q8N6P7 574 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 LIN37Q96GY3 246 aaPredicted RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 GPR179Q6PRD1 2367 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 LCTP09848 1927 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 NSG1A0A0A6YYJ2 146 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 C17orf51A8MQB3 221 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 SPINT1O43278 529 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 PTP4A3O75365 173 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 IFNA10P01566 189 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 THY1P04216 161 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 IFNA4P05014 189 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 CAPZBP47756 277 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 PJVKQ0ZLH3 352 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 GUCA2BQ16661 112 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 FAM199XQ6PEV8 388 aaPredicted RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 DOK3Q7L591 496 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 C6orf201Q7Z4U5 140 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 HGDQ93099 445 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms