RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 PRSS37A4D1T9 235 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 ARGFXA6NJG6 315 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 C17orf51A8MQB3 221 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 ZNF217O75362 1048 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 PRH1P02810 166 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 CTSBP07858 339 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 HPGDP15428 266 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 TBPP20226 339 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 DDTP30046 118 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 EMP2P54851 167 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 FAM3AP98173 230 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 SSX2Q16385 188 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 MED25Q71SY5 747 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 NKAIN3Q8N8D7 197 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 G6PC2Q9NQR9 355 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 SLC17A4Q9Y2C5 497 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 R4GMQ9 66 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 MYO15AQ9UKN7 3530 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 SPEGQ15772 3267 aa12.81□□□□□ -0.36
SMG6-215ENST00000574501 A0A087X0M5 115 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 TMEM269A0A1B0GVZ9 245 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 A0A1B0GX30 115 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 TERTO14746 1132 aaKnown RBP12.8□□□□□ -0.36
SMG6-215ENST00000574501 SOCS1O15524 211 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 WISP1O95388 367 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 CEBPGP53567 150 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 ACKR1Q16570 336 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 OR13G1Q8NGZ3 307 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 OR52N5Q8NH56 324 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 C16orf52Q8NHV5 167 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 SSX3Q99909 188 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 RARRES2Q99969 163 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 SMOC1Q9H4F8 434 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 HCRTR1O43613 425 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 F10P00742 488 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 SOD3P08294 240 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 CXCL1P09341 107 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 LSM6P62312 80 aaKnown RBP12.8□□□□□ -0.36
SMG6-215ENST00000574501 BTG2P78543 158 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 SLC22A18Q96BI1 424 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 NTNG2Q96CW9 530 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 SUCNR1Q9BXA5 334 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 BANF2Q9H503 90 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 COA3Q9Y2R0 106 aaPredicted RBP12.8□□□□□ -0.36
SMG6-215ENST00000574501 HEBP2Q9Y5Z4 205 aa12.8□□□□□ -0.36
SMG6-215ENST00000574501 BTBD17A6NE02 478 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 MASP2O00187 686 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 SRSF10O75494 262 aaKnown RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 RAD51DO75771 328 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 KAT7O95251 611 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 DANCRP0C864 163 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 FPR2P25090 351 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 MAS1LP35410 378 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 SGCGQ13326 291 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 PLPP4Q5VZY2 271 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 OPN5Q6U736 354 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 KDM8Q8N371 416 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 C19orf47Q8N9M1 422 aaKnown RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 CPNE4Q96A23 557 aaPredicted RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 MUCL1Q96DR8 90 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 ADAT3Q96EY9 351 aaPredicted RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 MISP3Q96FF7 219 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 TCTN2Q96GX1 697 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 MEMO1Q9Y316 297 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 IGLV1-36A0A0B4J1U3 117 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 A0A1W2PP11 408 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BKO60814 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 MPIG6BO95866 241 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BJP06899 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 RPS2P15880 293 aaKnown RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 SERPINA2P20848 420 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BOP23527 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BBP33778 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 PPM1AP35813 382 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 PPP1CCP36873 323 aaKnown RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BDP58876 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BCP62807 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 RAB1AP62820 205 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 CCINQ13939 588 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST2H2BEQ16778 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 PCK2Q16822 640 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 MAMDC2Q7Z304 686 aaPredicted RBP12.79□□□□□ -0.36
SMG6-215ENST00000574501 DCXRQ7Z4W1 244 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 ZNF610Q8N9Z0 462 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 OR5H2Q8NGV7 314 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BHQ93079 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 PRRX2Q99811 253 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 HIST1H2BNQ99877 126 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms