RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 MAB21L2Q9Y586 359 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 N6AMT1Q9Y5N5 214 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 DNAH3Q8TD57 4116 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 A0A0G2JND7 137 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-211ENST00000574099 TXNDC12O95881 172 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 TFF1P04155 84 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 TROVE2P10155 538 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC40-211ENST00000574099 CD28P10747 220 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 MUC1P15941 1255 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-211ENST00000574099 RPS27P42677 84 aaKnown RBP14.29□□□□□ -0.12
CCDC40-211ENST00000574099 IFI44LQ53G44 452 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 FGD3Q5JSP0 725 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 FKBP9P1Q75LS8 142 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 OR5T2Q8NGG2 359 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 OR8S1Q8NH09 359 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 STON2Q8WXE9 905 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 SPTSSAQ969W0 71 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 NKX3-1Q99801 234 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-211ENST00000574099 CYB5R1Q9UHQ9 305 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 COL7A1Q02388 2944 aa14.29□□□□□ -0.12
CCDC40-211ENST00000574099 RENP00797 406 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 SLC2A1P11166 492 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 AMY2BP19961 511 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 OMPP47874 163 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 UBE2E1P51965 193 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 MZT1Q08AG7 82 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 ACSM1Q08AH1 577 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 SLC36A3Q495N2 470 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 LRRC10Q5BKY1 277 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 C11orf53Q8IXP5 236 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 OR4K13Q8NH42 304 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 HSH2DQ96JZ2 352 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 RANBP3Q9H6Z4 567 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-211ENST00000574099 SNTG1Q9NSN8 517 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 CAPN7Q9Y6W3 813 aa14.28□□□□□ -0.12
CCDC40-211ENST00000574099 A0A1W2PQ09 198 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 UNC119BA6NIH7 251 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 CHST1O43916 411 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 GRK5P34947 590 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 HABP2Q14520 560 aaPredicted RBP14.27□□□□□ -0.13
CCDC40-211ENST00000574099 LRRC75BQ2VPJ9 315 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 NCR3LG1Q68D85 454 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 SMARCD3Q6STE5 483 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 WDR82Q6UXN9 313 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 DPY19L4Q7Z388 723 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 CYP4Z1Q86W10 505 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 SDR9C7Q8NEX9 313 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 C8orf46Q8TAG6 207 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 FANK1Q8TC84 345 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 FAM234AQ9H0X4 552 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 RNPEPL1Q9HAU8 725 aa14.27□□□□□ -0.13
CCDC40-211ENST00000574099 MRPL22Q9NWU5 206 aaKnown RBP14.27□□□□□ -0.13
CCDC40-211ENST00000574099 ANKRD30BLA7E2S9 258 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 H1F0P07305 194 aaKnown RBP14.26□□□□□ -0.13
CCDC40-211ENST00000574099 HIST1H1CP16403 213 aaKnown RBP14.26□□□□□ -0.13
CCDC40-211ENST00000574099 PRKXP51817 358 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 AGBL2Q5U5Z8 902 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 STUMQ69YW2 141 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 PGBD2Q6P3X8 592 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 OR1M1Q8NGA1 313 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 OR4F17Q8NGA8 305 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 DMRTB1Q96MA1 342 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 OR4F4Q96R69 305 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 NPFFR1Q9GZQ6 430 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 PPP1R3EQ9H7J1 279 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 METTL8Q9H825 291 aaKnown RBP14.26□□□□□ -0.13
CCDC40-211ENST00000574099 ELL3Q9HB65 397 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-211ENST00000574099 RAB18Q9NP72 206 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 ZNF391Q9UJN7 358 aa14.26□□□□□ -0.13
CCDC40-211ENST00000574099 TRBV4-1A0A0J9YWV2 114 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 MEGF11A6BM72 1044 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 NKX6-3A6NJ46 265 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 BBIP1A8MTZ0 92 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 K7EIL1 84 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 NPPAP01160 153 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 IGLL1P15814 213 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 TGM4P49221 684 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 BMXP51813 675 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 EMX1Q04741 257 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-211ENST00000574099 SEC23BQ15437 767 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 COQ5Q5HYK3 327 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 HCP5Q6MZN7 132 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 CRIP3Q6Q6R5 217 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 DRAM2Q6UX65 266 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 CCBE1Q6UXH8 406 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-211ENST00000574099 CBLL1Q75N03 491 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 ZBTB46Q86UZ6 589 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 NDUFA11Q86Y39 141 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 OR9Q1Q8NGQ5 310 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 CITED2Q99967 270 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-211ENST00000574099 COPS4Q9BT78 406 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 SLC25A10Q9UBX3 287 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-211ENST00000574099 ENPP4Q9Y6X5 453 aa14.25□□□□□ -0.13
CCDC40-211ENST00000574099 LOC100653049A0A140TA62 436 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 OR6C68A6NDL8 312 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 ADARB2-AS1A8MUL3 147 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 M0R1W7 72 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms