RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ACKR3P25106 362 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 BDKRB2P30411 391 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 RAD52P43351 418 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 UQCRFS1P47985 274 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 UCP2P55851 309 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 DYNC1I2Q13409 638 aaKnown RBP11.81□□□□□ -0.52
CCDC40-209ENST00000573474 GK2Q14410 553 aaPredicted RBP11.81□□□□□ -0.52
CCDC40-209ENST00000573474 OR8B8Q15620 311 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 IDNKQ5T6J7 187 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 ZBTB37Q5TC79 503 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 GLT8D1Q68CQ7 371 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 ALKBH2Q6NS38 261 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 MZT2AQ6P582 158 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 RFPL4BQ6ZWI9 263 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 UTS2BQ765I0 119 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 C1orf174Q8IYL3 243 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 OR6Q1Q8NGQ2 317 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 CA5BP1Q8WTZ4 195 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 BBC3Q96PG8 261 aaPredicted RBP11.81□□□□□ -0.52
CCDC40-209ENST00000573474 SLC30A2Q9BRI3 323 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 C6orf62Q9GZU0 229 aaPredicted RBP11.81□□□□□ -0.52
CCDC40-209ENST00000573474 KCNJ16Q9NPI9 418 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 NPAP1Q9NZP6 1156 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 DAPK2Q9UIK4 370 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 PEX16Q9Y5Y5 336 aa11.81□□□□□ -0.52
CCDC40-209ENST00000573474 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 IFITM5A6NNB3 132 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 AIPO00170 330 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 SULT1B1O43704 296 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 ALX3O95076 343 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 ERCC1P07992 297 aaPredicted RBP11.8□□□□□ -0.52
CCDC40-209ENST00000573474 CD37P11049 281 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 BMXP51813 675 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 PPP1CBP62140 327 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 NAAAQ02083 359 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 SPOCK1Q08629 439 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 TNK1Q13470 666 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 NKAIN3Q8N8D7 197 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 OR13C9Q8NGT0 318 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
CCDC40-209ENST00000573474 BCL2L14Q9BZR8 327 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 OR51B6Q9H340 312 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 POFUT1Q9H488 388 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 TMEM138Q9NPI0 162 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 MYO7BQ6PIF6 2116 aa11.8□□□□□ -0.52
CCDC40-209ENST00000573474 NKX2-6A6NCS4 301 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 GGT3PA6NGU5 568 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CRYAAP02489 173 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 ALDOBP05062 364 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 FAM157BP0CG42 384 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 SLC2A2P11168 524 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-209ENST00000573474 ATF1P18846 271 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CFPP27918 469 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CALCRP30988 508 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 S100A5P33763 92 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 THBS2P35442 1172 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 HLXQ14774 488 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-209ENST00000573474 MOGQ16653 247 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CLVS2Q5SYC1 327 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 SEZ6L2Q6UXD5 910 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 FBXW12Q6X9E4 464 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 C22orf34Q6ZV56 151 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CDH26Q8IXH8 852 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 OR5AS1Q8N127 324 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CSNK2A3Q8NEV1 391 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 OR51A2Q8NGJ7 313 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 OR1J1Q8NGS3 322 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 CHST5Q9GZS9 411 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 NEK6Q9HC98 313 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 ABRACLQ9P1F3 81 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 SPEF1Q9Y4P9 236 aa11.79□□□□□ -0.52
CCDC40-209ENST00000573474 KALRNO60229 2985 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 ZNF816-ZNF321PA0A0X1KG74 233 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 CTDSP2O14595 271 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 MAGEB3O15480 346 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 GMDSO60547 372 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 THBDP07204 575 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 RAC2P15153 192 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 AGAP20933 346 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 PTAFRP25105 342 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 CD40P25942 277 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 PRSS12P56730 875 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 UBE2V2Q15819 145 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 HES5Q5TA89 166 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 DDI2Q5TDH0 399 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 TMEM42Q69YG0 159 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 XKRXQ6PP77 449 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 WFDC8Q8IUA0 241 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 ZNF843Q8N446 348 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 OR56B2PQ8NGI1 322 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 SLC25A40Q8TBP6 338 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 PIGTQ969N2 578 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 WFIKKN1Q96NZ8 548 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 MRI1Q9BV20 369 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms