RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 OPRL1P41146 370 aa15□□□□□ -0.01
CHD3-214ENST00000572579 CX3CR1P49238 355 aa15□□□□□ -0.01
CHD3-214ENST00000572579 MNAT1P51948 309 aa15□□□□□ -0.01
CHD3-214ENST00000572579 EIF2B1Q14232 305 aaKnown RBP15□□□□□ -0.01
CHD3-214ENST00000572579 HS3ST5Q8IZT8 346 aa15□□□□□ -0.01
CHD3-214ENST00000572579 ARHGAP24Q8N264 748 aa15□□□□□ -0.01
CHD3-214ENST00000572579 ZMYND19Q96E35 227 aaPredicted RBP15□□□□□ -0.01
CHD3-214ENST00000572579 MMADHCQ9H3L0 296 aaPredicted RBP15□□□□□ -0.01
CHD3-214ENST00000572579 MUC13Q9H3R2 512 aa15□□□□□ -0.01
CHD3-214ENST00000572579 hCG_38984A0A1B0GV85 526 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 OOEPA6NGQ2 149 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 HOXA3O43365 443 aaPredicted RBP14.99□□□□□ -0.01
CHD3-214ENST00000572579 ADAM20O43506 726 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 WIPF1O43516 503 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 GSTT1P30711 240 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 MTNR1AP48039 350 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 ZNF121P58317 390 aaPredicted RBP14.99□□□□□ -0.01
CHD3-214ENST00000572579 CSNK2BP67870 215 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 TAF13Q15543 124 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 OR8B8Q15620 311 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 FAM98BQ52LJ0 330 aaKnown RBP14.99□□□□□ -0.01
CHD3-214ENST00000572579 TEX36Q5VZQ5 186 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 ERI1Q8IV48 349 aaKnown RBP14.99□□□□□ -0.01
CHD3-214ENST00000572579 SLC25A28Q96A46 364 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 REEP6Q96HR9 211 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 INTS14Q96SY0 518 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 UNKLQ9H9P5 680 aaKnown RBP14.99□□□□□ -0.01
CHD3-214ENST00000572579 KLHDC2Q9Y2U9 406 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 RHBDD3Q9Y3P4 386 aa14.99□□□□□ -0.01
CHD3-214ENST00000572579 DOCK11Q5JSL3 2073 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 CENPVL3A0A0U1RRI6 287 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 RIIAD1A6NNX1 92 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 ZNF879B4DU55 563 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 TBX1O43435 398 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 ENSAO43768 121 aaKnown RBP14.98□□□□□ -0.01
CHD3-214ENST00000572579 RAP2AP10114 183 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 OMGP23515 440 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 GRK5P34947 590 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 GSK3AP49840 483 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 GRB2P62993 217 aaKnown RBP14.98□□□□□ -0.01
CHD3-214ENST00000572579 PRR31Q5SQ13 230 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 C16orf87Q6PH81 154 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 FAM57BQ71RH2 274 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 SPERTQ8NA61 448 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 OR6N2Q8NGY6 317 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 GIPC3Q8TF64 312 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 CANT1Q8WVQ1 401 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 CCDC124Q96CT7 223 aaKnown RBP14.98□□□□□ -0.01
CHD3-214ENST00000572579 ASB9Q96DX5 294 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 LYZL4Q96KX0 146 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 TECTBQ96PL2 329 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 PCGF1Q9BSM1 259 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 SIRPDQ9H106 197 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 ZMAT3Q9HA38 289 aaKnown RBP14.98□□□□□ -0.01
CHD3-214ENST00000572579 DNAJC27Q9NZQ0 273 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 ERVK-18Q9QC07 812 aa14.98□□□□□ -0.01
CHD3-214ENST00000572579 TRAV38-1A0A0B4J264 116 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 DVL1O14640 695 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 XRCC2O43543 280 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 SELENOFO60613 162 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 GLCEO94923 617 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 IFNGP01579 166 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 ANXA2P07355 339 aaKnown RBP14.97□□□□□ -0.01
CHD3-214ENST00000572579 MDKP21741 143 aaPredicted RBP14.97□□□□□ -0.01
CHD3-214ENST00000572579 PRKACGP22612 351 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 CALB2P22676 271 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 ACKR3P25106 362 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 NPY4RP50391 375 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 RELBQ01201 579 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 GINS1Q14691 196 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 SHISA2Q6UWI4 295 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 Q6YL49 198 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 OR1M1Q8NGA1 313 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 WDFY2Q96P53 400 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 OR51V1Q9H2C8 321 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 KAAG1Q9UBP8 84 aa14.97□□□□□ -0.01
CHD3-214ENST00000572579 NOP16Q9Y3C1 178 aaKnown RBP14.97□□□□□ -0.01
CHD3-214ENST00000572579 A6NLC8 198 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 SRRM5B3KS81 715 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 FAM107AO95990 144 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 CST1P01037 141 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 TFF1P04155 84 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 ZNF3P17036 446 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 DDOSTP39656 456 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 SLC15A1P46059 708 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 BLVRAP53004 296 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 HCCSP53701 268 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 SRSF4Q08170 494 aaKnown RBP14.96□□□□□ -0.01
CHD3-214ENST00000572579 PLBD1Q6P4A8 553 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 WDR82Q6UXN9 313 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 BTN2A1Q7KYR7 527 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 BBS1Q8NFJ9 593 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 LRRC29Q8WV35 223 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 TMIGD2Q96BF3 282 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 CCL13Q99616 98 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 THTPAQ9BU02 230 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 TLNRD1Q9H1K6 362 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 OPA3Q9H6K4 179 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 BRD7Q9NPI1 651 aa14.96□□□□□ -0.01
CHD3-214ENST00000572579 TNFRSF19Q9NS68 423 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms