RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TLNRD1Q9H1K6 362 aa13.61□□□□□ -0.23
USP43-202ENST00000570475 OR5AC2Q9NZP5 309 aa13.61□□□□□ -0.23
USP43-202ENST00000570475 EDARQ9UNE0 448 aa13.61□□□□□ -0.23
USP43-202ENST00000570475 A0A1B0GX78 115 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 BLACEA4D250 179 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 EFSO43281 561 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 CLPSP04118 112 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 CRHP06850 196 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 OR10G3Q8NGC4 313 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 TLX3O43711 291 aaPredicted RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 DXOO77932 396 aaKnown RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 DIRAS3O95661 229 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 IGLV3-21P80748 117 aaPredicted RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 PHLDA2Q53GA4 152 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 TEX30Q5JUR7 227 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 RPL7L1Q6DKI1 246 aaKnown RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 CLEC18BQ6UXF7 455 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 OR5AP2Q8NGF4 316 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 KCNG3Q8TAE7 436 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 SVILO95425 2214 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 ADAM10O14672 748 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 XRCC2O43543 280 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 NUDT21O43809 227 aaKnown RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 NXPH3O95157 252 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 F10P00742 488 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 IFNA21P01568 189 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 CDCP2Q5VXM1 449 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 LPCAT3Q6P1A2 487 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 TFAP2EQ6VUC0 442 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 MEX3BQ6ZN04 569 aaKnown RBP13.6□□□□□ -0.23
USP43-202ENST00000570475 WDFY1Q8IWB7 410 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 MITD1Q8WV92 249 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 OR10A2Q9H208 303 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 SLC17A5Q9NRA2 495 aa13.6□□□□□ -0.23
USP43-202ENST00000570475 ZNF735P0CB33 412 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 CYCSP99999 105 aaKnown RBP13.59□□□□□ -0.23
USP43-202ENST00000570475 TAF9Q16594 264 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 NEK7Q8TDX7 302 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 ASB10Q8WXI3 467 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 FBXO17Q96EF6 278 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 C12orf57Q99622 126 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 HDHD3Q9BSH5 251 aaPredicted RBP13.59□□□□□ -0.23
USP43-202ENST00000570475 C2orf16Q68DN1 1984 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 DOCK7Q96N67 2140 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 TSPAN2O60636 221 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 KLK2P20151 261 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 ROM1Q03395 351 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 C6orf201Q7Z4U5 140 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 HOXB13Q92826 284 aaPredicted RBP13.59□□□□□ -0.23
USP43-202ENST00000570475 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.59□□□□□ -0.23
USP43-202ENST00000570475 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.59□□□□□ -0.23
USP43-202ENST00000570475 OR6C65A6NJZ3 312 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 NME2P1O60361 137 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 ACTL6AO96019 429 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 OMGP23515 440 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 KCNJ3P48549 501 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 HSD17B11Q8NBQ5 300 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 OR8B12Q8NGG6 310 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 OR10Z1Q8NGY1 313 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 SULT4A1Q9BR01 284 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 BCL2L14Q9BZR8 327 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 ALX4Q9H161 411 aaPredicted RBP13.59□□□□□ -0.23
USP43-202ENST00000570475 PARPBPQ9NWS1 579 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 MEMO1Q9Y316 297 aa13.59□□□□□ -0.23
USP43-202ENST00000570475 RAMP1O60894 148 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 DAOP14920 347 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 NPBWR1P48145 328 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 RRADP55042 308 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 SCAND1P57086 179 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 TMEM128Q5BJH2 165 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 TSPO2Q5TGU0 170 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 LDLRAD3Q86YD5 345 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 SULF2Q8IWU5 870 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 TAF9BQ9HBM6 251 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 NXT1Q9UKK6 140 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 SPTBN5Q9NRC6 3674 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 K7EPK0 472 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 ZNF217O75362 1048 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 DUS4LO95620 317 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 S100A9P06702 114 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 NME1P15531 152 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 FASLGP48023 281 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 PEA15Q15121 130 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 SPIN3Q5JUX0 258 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 PAQR4Q8N4S7 273 aaPredicted RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 FAM71E2Q8N5Q1 922 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 ESX1Q8N693 406 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 SUMF1Q8NBK3 374 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 ST7LQ8TDW4 575 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 RRNAD1Q96FB5 475 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 UTP23Q9BRU9 249 aaKnown RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 ZNF2Q9BSG1 426 aaPredicted RBP13.58□□□□□ -0.24
USP43-202ENST00000570475 GPR173Q9NS66 373 aa13.58□□□□□ -0.24
USP43-202ENST00000570475 PATE4P0C8F1 98 aa13.57□□□□□ -0.24
USP43-202ENST00000570475 EFNA3P52797 238 aa13.57□□□□□ -0.24
USP43-202ENST00000570475 TAS2R31P59538 309 aa13.57□□□□□ -0.24
USP43-202ENST00000570475 DRAM2Q6UX65 266 aa13.57□□□□□ -0.24
USP43-202ENST00000570475 ZSCAN4Q8NAM6 433 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms