RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF319Q9P2F9 582 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 DUX4Q9UBX2 424 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 CLN8Q9UBY8 286 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 TGP01266 2768 aa11.49□□□□□ -0.57
GTF3C1-211ENST00000569653 NOTCH1P46531 2555 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 LGALS8O00214 317 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF593O00488 134 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 PHYHO14832 338 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 KCNAB3O43448 404 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 CIB2O75838 187 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 ANXA8P13928 327 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 ZNF823P16415 610 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 CPT2P23786 658 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 ENTPD1P49961 510 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 SLC25A1P53007 311 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 POU4F2Q12837 409 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 FOXL1Q12952 345 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 MALLQ13021 153 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 PRR31Q5SQ13 230 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 DRAM2Q6UX65 266 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 BTNL3Q6UXE8 466 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 RBMS3Q6XE24 437 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 TMEM179BQ7Z7N9 219 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 FAM90A1Q86YD7 464 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 C1orf87Q8N0U7 546 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 GCSAMQ8N6F7 178 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 SGMS2Q8NHU3 365 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 DNAJC9Q8WXX5 260 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 SPTSSAQ969W0 71 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 NRBF2Q96F24 287 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 DUS3LQ96G46 650 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 COPS4Q9BT78 406 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 PRDM13Q9H4Q3 707 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 C1orf123Q9NWV4 160 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
GTF3C1-211ENST00000569653 IGHV3OR15-7A0A075B7D8 119 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 GGT3PA6NGU5 568 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 FAM183AA6NL82 134 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 HOXA3O43365 443 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 TIPRLO75663 272 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 FCGR1AP12314 374 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 OSMP13725 252 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 MDKP21741 143 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 OMGP23515 440 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 GRK5P34947 590 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 CFHR2P36980 270 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 RELBQ01201 579 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 KPNB1Q14974 876 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 ZSCAN26Q16670 478 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 TEX30Q5JUR7 227 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 HS3ST5Q8IZT8 346 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 OR11L1Q8NGX0 322 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 ERGIC1Q969X5 290 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 SEH1LQ96EE3 360 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 KCNJ15Q99712 375 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 FGF23Q9GZV9 251 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 UNKLQ9H9P5 680 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 CMC2Q9NRP2 79 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 CENPMQ9NSP4 180 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 MRPL15Q9P015 296 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 N6AMT1Q9Y5N5 214 aa11.47□□□□□ -0.57
GTF3C1-211ENST00000569653 GMDSO60547 372 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 LHBP01229 141 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 GYPAP02724 150 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 GRPP07492 148 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 IRF2P14316 349 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 AMY2BP19961 511 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 PAICSP22234 425 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 POU1F1P28069 291 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 FMO3P31513 532 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 CX3CR1P49238 355 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 BLVRAP53004 296 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 ACTR3P61158 418 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 CSNK2BP67870 215 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 FAM3AP98173 230 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 SRSF4Q08170 494 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 SLC16A9Q7RTY1 509 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 OR6K6Q8NGW6 343 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 SGK3Q96BR1 496 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 TECTBQ96PL2 329 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 PCGF1Q9BSM1 259 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 TEX12Q9BXU0 123 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 SIRPDQ9H106 197 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 ZMAT3Q9HA38 289 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 FN3KRPQ9HA64 309 aa11.46□□□□□ -0.57
GTF3C1-211ENST00000569653 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 hCG_38984A0A1B0GV85 526 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 OOEPA6NGQ2 149 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 ZNF878C9JN71 531 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 ANKRD65E5RJM6 399 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 ADAM20O43506 726 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 ENSAO43768 121 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 PRKACGP22612 351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms