RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 OPA3Q9H6K4 179 aa9.63□□□□□ -0.87
GTF3C1-209ENST00000568569 METTL8Q9H825 291 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-209ENST00000568569 SRA1Q9HD15 236 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-209ENST00000568569 M0R1W7 72 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 ACOT8O14734 319 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 MPIG6BO95866 241 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 RENP00797 406 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 HLA-DQA2P01906 255 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 FXYD6P3P58550 94 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 ELF3P78545 371 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 BLMHQ13867 455 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 AANATQ16613 207 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 IFI44LQ53G44 452 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 GLYATL3Q5SZD4 288 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 C11orf87Q6NUJ2 197 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 LNX2Q8N448 690 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 OR8S1Q8NH09 359 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 H1FXQ92522 213 aaKnown RBP9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 MAP6Q96JE9 813 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 MMP28Q9H239 520 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 KCNG2Q9UJ96 466 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 SF3B6Q9Y3B4 125 aaKnown RBP9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 COL7A1Q02388 2944 aa9.62□□□□□ -0.87
GTF3C1-209ENST00000568569 A0A1W2PRQ8 180 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 ANKRD30BLA7E2S9 258 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 MRASO14807 208 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 ZNF682O95780 498 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 TROVE2P10155 538 aaKnown RBP eCLIP9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 OTX1P32242 354 aaPredicted RBP9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 DDOSTP39656 456 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 OMPP47874 163 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 TGM4P49221 684 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 CSNK2BP67870 215 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 DGCR6Q14129 220 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 METTL21CQ5VZV1 264 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 STUMQ69YW2 141 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 CRIP3Q6Q6R5 217 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 SMARCD3Q6STE5 483 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 DRAM2Q6UX65 266 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 WDR82Q6UXN9 313 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 FKBP9P1Q75LS8 142 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 DPY19L4Q7Z388 723 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 WDR86Q86TI4 376 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 ZBTB46Q86UZ6 589 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 CYP4Z1Q86W10 505 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 C11orf53Q8IXP5 236 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 ERMAPQ96PL5 475 aaPredicted RBP9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 TMEM120AQ9BXJ8 343 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 DNTTIP1Q9H147 329 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 KRCC1Q9NPI7 259 aaPredicted RBP9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 RPRD1BQ9NQG5 326 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 ADA2Q9NZK5 511 aa9.61□□□□□ -0.87
GTF3C1-209ENST00000568569 A0A1W2PQ09 198 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 UNC119BA6NIH7 251 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 NKX6-3A6NJ46 265 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 CHST1O43916 411 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 TIPRLO75663 272 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 H1F0P07305 194 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 CD28P10747 220 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 SELLP14151 372 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 AMY2BP19961 511 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 ANOS1P23352 680 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 NAA10P41227 235 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 FGD3Q5JSP0 725 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 ATPAF1Q5TC12 328 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 OR1M1Q8NGA1 313 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 OR5D13Q8NGL4 314 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 OR4C15Q8NGM1 316 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 OR9Q1Q8NGQ5 310 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 FANK1Q8TC84 345 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 C17orf50Q8WW18 174 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 RORBQ92753 470 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 SEH1LQ96EE3 360 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 SIKE1Q9BRV8 207 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 NSRP1Q9H0G5 558 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 MRGBPQ9NV56 204 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 GID8Q9NWU2 228 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 MRPL22Q9NWU5 206 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 SLC25A10Q9UBX3 287 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 ENPP4Q9Y6X5 453 aa9.6□□□□□ -0.87
GTF3C1-209ENST00000568569 A0A0G2JND7 137 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 K7EIL1 84 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 ARPC3O15145 178 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 XRCC2O43543 280 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 ANGPTL7O43827 346 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 HIST1H1CP16403 213 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 ZNF823P16415 610 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 CD33P20138 364 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 SLC6A6P31641 620 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 GSK3BP49841 420 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 SLC7A2P52569 658 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 ZBTB37Q5TC79 503 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 AGBL2Q5U5Z8 902 aa9.59□□□□□ -0.87
GTF3C1-209ENST00000568569 CBLL1Q75N03 491 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms