RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	CD80	P33681	288 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	CX3CR1	P49238	355 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	SEC61A1	P61619	476 aa	Known RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	GNB2	P62879	340 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC34A1	Q06495	639 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	PAX8	Q06710	450 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	MPPED2	Q15777	294 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	TIGD6	Q17RP2	521 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF404	Q494X3	552 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAM201A	Q5SY85	155 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMEM236	Q5W0B7	351 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZFP1	Q6P2D0	407 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAM57B	Q71RH2	274 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	NLRC3	Q7RTR2	1065 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	TIGD4	Q8IY51	512 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	HS3ST5	Q8IZT8	346 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	BPIFB2	Q8N4F0	458 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	DEFB108B	Q8NET1	73 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	THEM6	Q8WUY1	208 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	DNAJC9	Q8WXX5	260 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	STMN2	Q93045	179 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPSB4	Q96A44	273 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZMYND19	Q96E35	227 aa	Predicted RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	NEIL1	Q96FI4	390 aa	Predicted RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	DUS3L	Q96G46	650 aa	Known RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	JMJD8	Q96S16	334 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	MRI1	Q9BV20	369 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	SUCNR1	Q9BXA5	334 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAM192A	Q9GZU8	254 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	C14orf119	Q9NWQ9	140 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	RNF7	Q9UBF6	113 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR5V1	Q9UGF6	321 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	PPIAL4A	Q9Y536	164 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	INSIG2	Q9Y5U4	225 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	AUP1	Q9Y679	476 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	CUBN	O60494	3623 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ANK3	Q12955	4377 aa	Known RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	KIR2DS1	A0A191URI9	304 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635		A8MXK9	166 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	TRIM77	I1YAP6	450 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	LGALS8	O00214	317 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	NDUFA2	O43678	99 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SELENOF	O60613	162 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	TIPRL	O75663	272 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	RGS9	O75916	674 aa	Predicted RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	PTBP3	O95758	552 aa	Known RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	FSHB	P01225	129 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	GRP	P07492	148 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	LYN	P07948	512 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	ANOS1	P23352	680 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	CFL1	P23528	166 aa	Known RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OPRL1	P41146	370 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	PITPNB	P48739	271 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	GSK3A	P49840	483 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	CRISP1	P54107	249 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF121	P58317	390 aa	Predicted RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	HILS1	P60008	231 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	RPS7	P62081	194 aa	Known RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAM3A	P98173	230 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	PAX2	Q02962	417 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	RCN1	Q15293	331 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	KCNJ8	Q15842	424 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SNAPC1	Q16533	368 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	KLHL12	Q53G59	568 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	ARMCX4	Q5H9R4	360 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC35D3	Q5M8T2	416 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRAMEF6	Q5VXH4	476 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAHD1	Q6P587	224 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	LYPD2	Q6UXB3	125 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	BTNL3	Q6UXE8	466 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	LRRN1	Q6UXK5	716 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	DCDC5	Q6ZRR9	648 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC16A9	Q7RTY1	509 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRSS45	Q7RTY3	260 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	BOLL	Q8N9W6	283 aa	Known RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SEMA6D	Q8NFY4	1073 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR8B3	Q8NGG8	313 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR56B2P	Q8NGI1	322 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR8S1	Q8NH09	359 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR5K1	Q8NHB7	308 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OTOS	Q8NHW6	89 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	RAB40A	Q8WXH6	277 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	DVL3	Q92997	716 aa	Predicted RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	REEP6	Q96HR9	211 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	PGAM5	Q96HS1	289 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR8B2	Q96RD0	313 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	AMELY	Q99218	206 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	TEAD3	Q99594	435 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC6A7	Q99884	636 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	ADAT1	Q9BUB4	502 aa	Known RBP	5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR10A2	Q9H208	303 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	RGCC	Q9H4X1	137 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	NTN4	Q9HB63	628 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC25A19	Q9HC21	320 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	BRD7	Q9NPI1	651 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	TRIM36	Q9NQ86	728 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	C1orf123	Q9NWV4	160 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	TVP23B	Q9NYZ1	205 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	DNAJC27	Q9NZQ0	273 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms