RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GPR139Q6DWJ6 353 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 SMARCD3Q6STE5 483 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 DPY19L2P2Q6ZN68 376 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 RASSF6Q6ZTQ3 369 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 MOGAT3Q86VF5 341 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 ZDHHC13Q8IUH4 622 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 AKR7LQ8NHP1 331 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 FAM46AQ96IP4 442 aaKnown RBP7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 MEGF10Q96KG7 1140 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 COG8Q96MW5 612 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 GPX7Q96SL4 187 aaPredicted RBP7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 FEVQ99581 238 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 S100A14Q9HCY8 104 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 TBCCD1Q9NVR7 557 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 BAIAP2Q9UQB8 552 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 MAB21L2Q9Y586 359 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 TIMM10BQ9Y5J6 103 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 KPTNQ9Y664 436 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 U3KQV3 271 aa7.41□□□□□ -1.22
VPS9D1-205ENST00000565452 A6NIZ1 184 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 ADARB2-AS1A8MUL3 147 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 LRRN3E7EW58 273 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 CDC42EP2O14613 210 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 NPFFO15130 113 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 ARPC3O15145 178 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 NDUFA2O43678 99 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 PF4P02776 101 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 PGA4P0DJD7 388 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 PGA3P0DJD8 388 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 RPL4P36578 427 aaKnown RBP7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 AQP2P41181 271 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 GUCA1AP43080 201 aaPredicted RBP7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 GPR4P46093 362 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 RPS6KA3P51812 740 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 CTXN1P60606 82 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 RAP1BP61224 184 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 RPL27P61353 136 aaKnown RBP7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 PCBD1P61457 104 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 RAP1AP62834 184 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 MRPS34P82930 218 aaKnown RBP7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 FHL1Q13642 323 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 HIST3H3Q16695 136 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 METAP1DQ6UB28 335 aaPredicted RBP7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 VMO1Q7Z5L0 202 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 AQP11Q8NBQ7 271 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 Q8NFD4 153 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 OR10G2Q8NGC3 310 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 OR11L1Q8NGX0 322 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 OR51A7Q8NH64 312 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 PYDC1Q8WXC3 89 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 MAP6Q96JE9 813 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 SSX3Q99909 188 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 TEX12Q9BXU0 123 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 NPFFR1Q9GZQ6 430 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 SEMA6AQ9H2E6 1030 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 DCLRE1BQ9H816 532 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 NRIP3Q9NQ35 241 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 C8orf4Q9NR00 106 aa7.4□□□□□ -1.22
VPS9D1-205ENST00000565452 HYDINQ4G0P3 5121 aa7.4□□□□□ -1.23
VPS9D1-205ENST00000565452 TRAV27A0A087WT01 109 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ERICH4A6NGS2 130 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 MCIDASD6RGH6 385 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 H3BNX3 289 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 H3BUX3 64 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 CLIC3O95833 236 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ABHD16AO95870 558 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 TXNDC12O95881 172 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ACADSP16219 412 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 SLC6A6P31641 620 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ESRRGP62508 458 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 LY6EQ16553 131 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 FAM27BQ5VT28 67 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 UNQ9370/PRO34162Q6UXP9 181 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 BTN2A1Q7KYR7 527 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 AMIGO2Q86SJ2 522 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 CMTM4Q8IZR5 234 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 PQLC1Q8N2U9 271 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 LRRC75AQ8NAA5 344 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 OR52L1Q8NGH7 329 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ERGIC1Q969X5 290 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ZNF582Q96NG8 517 aaPredicted RBP7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 RBP7Q96R05 134 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 DCTN5Q9BTE1 182 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 C9orf16Q9BUW7 83 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 ALG12Q9BV10 488 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 OR2H1Q9GZK4 316 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 GABARAPL1Q9H0R8 117 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 OR52D1Q9H346 318 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 TRIM36Q9NQ86 728 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 VNN3Q9NY84 501 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 GRHPRQ9UBQ7 328 aa7.39□□□□□ -1.23
VPS9D1-205ENST00000565452 XKRYO14609 159 aa7.38□□□□□ -1.23
VPS9D1-205ENST00000565452 ADAM20O43506 726 aa7.38□□□□□ -1.23
VPS9D1-205ENST00000565452 OSMP13725 252 aa7.38□□□□□ -1.23
VPS9D1-205ENST00000565452 RAC2P15153 192 aa7.38□□□□□ -1.23
VPS9D1-205ENST00000565452 SDHAP31040 664 aa7.38□□□□□ -1.23
VPS9D1-205ENST00000565452 CDAP32320 146 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms