RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 IGFL1Q6UW32 110 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 RTL4Q6ZR62 310 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 TRAM1L1Q8N609 369 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 C19orf18Q8NEA5 215 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 RXFP4Q8TDU9 374 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 RERGQ96A58 199 aaPredicted RBP2.48□□□□□ -2.01
CHD9-215ENST00000565442 CERS2Q96G23 380 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 SCGB3A2Q96PL1 93 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 BLZF1Q9H2G9 400 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 EXOSC4Q9NPD3 245 aaKnown RBP2.48□□□□□ -2.01
CHD9-215ENST00000565442 PRSS16Q9NQE7 514 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 CHRAC1Q9NRG0 131 aa2.48□□□□□ -2.01
CHD9-215ENST00000565442 AHDC1Q5TGY3 1603 aaPredicted RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 IGLV3-12A0A075B6K2 115 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 TRAV6A0A075B6T7 132 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 IGHV3-72A0A0B4J1Y9 119 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 IGHV7-4-1A0A0J9YVY3 117 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 CENPVL3A0A0U1RRI6 287 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 ZNF99A8MXY4 864 aaPredicted RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 RAD1O60671 282 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 HSBP1O75506 76 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 FARS2O95363 451 aaKnown RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 ZNF14P17017 642 aaPredicted RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 BCAP31P51572 246 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 DOC2AQ14183 400 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 TSC22D1Q15714 1073 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 PRSS8Q16651 343 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 TEX30Q5JUR7 227 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 MDP1Q86V88 176 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 PROKR2Q8NFJ6 384 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 C17orf50Q8WW18 174 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 PIH1D2Q8WWB5 315 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 ASZ1Q8WWH4 475 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 ISOC2Q96AB3 205 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 ISG20Q96AZ6 181 aaKnown RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 ZNF707Q96C28 371 aaPredicted RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 RMI2Q96E14 147 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 CSPG4P5Q96PW8 444 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 SULT4A1Q9BR01 284 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 SCRT1Q9BWW7 348 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 TOLLIPQ9H0E2 274 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 DEFB129Q9H1M3 183 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 OR2AG1Q9H205 316 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 CD209Q9NNX6 404 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 RPRD1BQ9NQG5 326 aaKnown RBP2.47□□□□□ -2.01
CHD9-215ENST00000565442 RHBDL2Q9NX52 303 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 C21orf62Q9NYP8 219 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 HES2Q9Y543 173 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 BRWD3Q6RI45 1802 aa2.47□□□□□ -2.01
CHD9-215ENST00000565442 ADGRA3Q8IWK6 1321 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 CATP04040 527 aaKnown RBP2.46□□□□□ -2.02
CHD9-215ENST00000565442 TACSTD2P09758 323 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 SPAG1Q07617 926 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 ZNF616Q08AN1 781 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 SHHQ15465 462 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 YIF1BQ5BJH7 314 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 OR2T5Q6IEZ7 315 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 H3F3CQ6NXT2 135 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 OPN5Q6U736 354 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 RAB43Q86YS6 212 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 OR5T1Q8NG75 326 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 OR4M1Q8NGD0 313 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 OR2T29Q8NH02 315 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 NAT6Q93015 286 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 KIAA1143Q96AT1 154 aaPredicted RBP2.46□□□□□ -2.02
CHD9-215ENST00000565442 KCNS1Q96KK3 526 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 C18orf15Q96N68 181 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 AGMATQ9BSE5 352 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 FBXO8Q9NRD0 319 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 SIGLEC9Q9Y336 463 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 S4R3C0 116 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 PLEKHG2Q9H7P9 1386 aa2.46□□□□□ -2.02
CHD9-215ENST00000565442 IGHV3-49A0A0A0MS15 119 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 SLC22A20A6NK97 555 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 TAAR5O14804 337 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 CHMP2AO43633 222 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 PLIN3O60664 434 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 MT-ND4P03905 459 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 PMCHP20382 165 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 GABRR2P28476 465 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 PRLHRP49683 370 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 PSMD4P55036 377 aaKnown RBP2.45□□□□□ -2.02
CHD9-215ENST00000565442 DAOAP59103 153 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 IFITM3Q01628 133 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 DMC1Q14565 340 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 C5orf64Q2M2E5 130 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 KLHL40Q2TBA0 621 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 SLC25A35Q3KQZ1 300 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 MLIPQ5VWP3 458 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 CD300LGQ6UXG3 332 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 UNQ9165/PRO28630Q6UXU0 137 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 MRPL21Q7Z2W9 205 aaKnown RBP2.45□□□□□ -2.02
CHD9-215ENST00000565442 LRRC52Q8N7C0 313 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 RTN4IP1Q8WWV3 396 aaPredicted RBP2.45□□□□□ -2.02
CHD9-215ENST00000565442 CDS1Q92903 461 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 RCN3Q96D15 328 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 OR4K3Q96R72 315 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 KCNS3Q9BQ31 491 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 ULBP2Q9BZM5 246 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms