RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SP9P0CG40 484 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 RCVRNP35243 200 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 CSNK1A1P48729 337 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 EFNB2P52799 333 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 SUCLG1P53597 346 aaKnown RBP6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 CLDN17P56750 224 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 RAC3P60763 192 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 PLA2G7Q13093 441 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 EIF3IQ13347 325 aaKnown RBP6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 MFAP5Q13361 173 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 TAF13Q15543 124 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM189A2Q15884 450 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 ST3GAL2Q16842 350 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 RAET1LQ5VY80 246 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM53Q6P2H8 277 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 GLDNQ6ZMI3 551 aaPredicted RBP6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 C20orf204Q6ZNR8 217 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 FOXL2NBQ6ZUU3 175 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 PGAP1Q75T13 922 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 PPP1R32Q7Z5V6 425 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 WFDC8Q8IUA0 241 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC22A24Q8N4F4 322 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 SPICQ8N5J4 248 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 CCDC54Q8NEL0 328 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 GJC3Q8NFK1 279 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 OR11H7Q8NGC8 314 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 GCDHQ92947 438 aaPredicted RBP6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM54Q969K7 222 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 FGGYQ96C11 551 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 LIN37Q96GY3 246 aaPredicted RBP6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 ARRDC1-AS1Q9H2J1 176 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 METTL17Q9H7H0 456 aaPredicted RBP6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF222Q9UK12 451 aa6.4□□□□□ -1.39
HERPUD1-209ENST00000564678 COL27A1Q8IZC6 1860 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 A0A1B0GTI1 187 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 NPIPA2E9PIF3 369 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 NPIPA3F8WFD2 350 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 M0R296 226 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 RAMP1O60894 148 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 ALDOBP05062 364 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 SERPINA7P05543 415 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 RAB3AP20336 220 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 CCL1P22362 96 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 TCEA1P23193 301 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 CLDN6P56747 220 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 GALK2Q01415 458 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 SPOCK1Q08629 439 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 RAB32Q13637 225 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 LINC00303Q3SY05 128 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM255AQ5JRV8 349 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 INO80CQ6PI98 192 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 SEZ6L2Q6UXD5 910 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 CFAP77Q6ZQR2 320 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 LURAP1LQ8IV03 231 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM109AQ8N4B1 249 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 JAGN1Q8N5M9 183 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM229BQ8NBD8 167 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 CLEC1AQ8NC01 280 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 OR1M1Q8NGA1 313 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 OR51A2Q8NGJ7 313 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 OR6N1Q8NGY5 312 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 ALX4Q9H161 411 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 PNRC2Q9NPJ4 139 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 PLSCR3Q9NRY6 295 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 ASH2LQ9UBL3 628 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 SCP2D1Q9UJQ7 156 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC5A6Q9Y289 635 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 RHBDD3Q9Y3P4 386 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 ZDBF2Q9HCK1 2354 aa6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 PHF3Q92576 2039 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-209ENST00000564678 SSNA1O43805 119 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 HPXP02790 462 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 PTHLHP12272 177 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 MSR1P21757 451 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 CDAP32320 146 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 TAS2R19P59542 299 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 Q5BKY6 102 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 CARD17Q5XLA6 110 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF782Q6ZMW2 699 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF767PQ75MW2 155 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 DOK3Q7L591 496 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 TMPRSS7Q7RTY8 843 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 TIPARPQ7Z3E1 657 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 BIVMQ86UB2 503 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 OR9K2Q8NGE7 335 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 OR1J2Q8NGS2 313 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 CT55Q8WUE5 264 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 SEH1LQ96EE3 360 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 GPR87Q9BY21 358 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 PLEKHA2Q9HB19 425 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZFP64Q9NPA5 681 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 NCOA6Q14686 2063 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 A0A0J9YW62 118 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ARPC1BO15143 372 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 RER1O15258 196 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 DHHO43323 396 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 CREBL2O60519 120 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF780AO75290 641 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms