RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 OR6K6Q8NGW6 343 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 ASB9Q96DX5 294 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 INTS14Q96SY0 518 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 NIPSNAP1Q9BPW8 284 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 ABHD6Q9BV23 337 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 MMP24Q9Y5R2 645 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 hCG_38984A0A1B0GV85 526 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 ANKRD30BLA7E2S9 258 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 SRRM5B3KS81 715 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 C3orf80F5H4A9 247 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 ACOT8O14734 319 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 ADAM20O43506 726 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 GLCEO94923 617 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 ECDO95905 644 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 CFL1P23528 166 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 GSTT1P30711 240 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 OPRL1P41146 370 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 EIF2B1Q14232 305 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 OR8B8Q15620 311 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 DEFB112Q30KQ8 113 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 ZNF826PQ6ZT77 177 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 SHFQ7M4L6 423 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 DPY19L4Q7Z388 723 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM90A1Q86YD7 464 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 TIGD4Q8IY51 512 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 TMEM86BQ8N661 226 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 PNLDC1Q8NA58 520 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 OR52H1Q8NGJ2 320 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 TEX47Q8TBZ9 253 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 DMRTB1Q96MA1 342 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 TBX15Q96SF7 602 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 FEVQ99581 238 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 SLITRK2Q9H156 845 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 C1orf21Q9H246 121 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 MMADHCQ9H3L0 296 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 RGCCQ9H4X1 137 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 SMURF1Q9HCE7 757 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 PKD1L1Q8TDX9 2849 aa14.27□□□□□ -0.13
VPS9D1-203ENST00000563798 FCN3O75636 299 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 TIPRLO75663 272 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 GRPP07492 148 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 MUC1P15941 1255 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 HOXB6P17509 224 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 KLHL12Q53G59 568 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 BRD3OSQ6XYD6 125 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 Q6YL49 198 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 WDR86Q86TI4 376 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 GIPC3Q8TF64 312 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 REEP6Q96HR9 211 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM71F1Q96KD3 344 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 WDFY2Q96P53 400 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 TECTBQ96PL2 329 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 SIRPDQ9H106 197 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 TLNRD1Q9H1K6 362 aa14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-203ENST00000563798 MEGF8Q7Z7M0 2845 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 CENPVL3A0A0U1RRI6 287 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 MDFIC2A0A1B0GVS7 189 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM183AA6NL82 134 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 A6NLC8 198 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 HOXA3O43365 443 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 TBX1O43435 398 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 TOX4O94842 621 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 ANXA2P07355 339 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 HSD11B1P28845 292 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 GSK3AP49840 483 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 PDCD1Q15116 288 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 SNCBQ16143 134 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 TIGD6Q17RP2 521 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 SPATC1Q76KD6 591 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 ERI1Q8IV48 349 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 ADGRG5Q8IZF4 528 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 ZNF454Q8N9F8 522 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 BOLLQ8N9W6 283 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 CSNK2A3Q8NEV1 391 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 OR1M1Q8NGA1 313 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 OR6N2Q8NGY6 317 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 OR8S1Q8NH09 359 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 AMELYQ99218 206 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 PCGF1Q9BSM1 259 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 CHID1Q9BWS9 393 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 OR10A2Q9H208 303 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 MED20Q9H944 212 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 TAS2R1Q9NYW7 299 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 KIF17Q9P2E2 1029 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 ZNF319Q9P2F9 582 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 N6AMT1Q9Y5N5 214 aa14.25□□□□□ -0.13
VPS9D1-203ENST00000563798 A0A1B0GUS0 222 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 AQP12BA6NM10 295 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 DVL1O14640 695 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM107AO95990 144 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 CST1P01037 141 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 GYPAP02724 150 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 SFTPBP07988 381 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 ZNF121P58317 390 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 WDR82Q6UXN9 313 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 KRT74Q7RTS7 529 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 AQP12AQ8IXF9 295 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms