RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 GSC2O15499 205 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 GRPP07492 148 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 LYNP07948 512 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 ANOS1P23352 680 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 OPRL1P41146 370 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 RASSF2P50749 326 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 FAM3AP98173 230 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 GABPB1Q06547 395 aaPredicted RBP14.08□□□□□ -0.16
CLK3-210ENST00000563112 PAX8Q06710 450 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 SNCBQ16143 134 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 SLC35D3Q5M8T2 416 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 OTOSQ8NHW6 89 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 FAM216AQ8WUB2 273 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 C22orf15Q8WYQ4 148 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 DVL3Q92997 716 aaPredicted RBP14.08□□□□□ -0.16
CLK3-210ENST00000563112 BRD7Q9NPI1 651 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 C1orf123Q9NWV4 160 aa14.08□□□□□ -0.16
CLK3-210ENST00000563112 IGHV2-70DA0A0C4DH43 119 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 PHYHO14832 338 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 NDUFA2O43678 99 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 SELENOFO60613 162 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 PPIAL4GP0DN37 164 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 CD80P33681 288 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 GNALP38405 381 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 NPY4RP50391 375 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 ZNF121P58317 390 aaPredicted RBP14.07□□□□□ -0.16
CLK3-210ENST00000563112 OR8B8Q15620 311 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 GFOD2Q3B7J2 385 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 LYPD2Q6UXB3 125 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 FTMTQ8N4E7 242 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 C19orf18Q8NEA5 215 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 CSNK2A3Q8NEV1 391 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 AMELYQ99218 206 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 CADM1Q9BY67 442 aaKnown RBP14.07□□□□□ -0.16
CLK3-210ENST00000563112 MMADHCQ9H3L0 296 aaPredicted RBP14.07□□□□□ -0.16
CLK3-210ENST00000563112 RGCCQ9H4X1 137 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 SLC25A19Q9HC21 320 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 PAPOLBQ9NRJ5 636 aaKnown RBP14.07□□□□□ -0.16
CLK3-210ENST00000563112 ERVK-18Q9QC07 812 aa14.07□□□□□ -0.16
CLK3-210ENST00000563112 TENM1Q9UKZ4 2725 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 TRAV38-1A0A0B4J264 116 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 KIR2DS1A0A191URI9 304 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 hCG_1807616A0A1W2PRN6 198 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 CRISP1P54107 249 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 BNIP1Q12981 228 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 SNAPC1Q16533 368 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 TMEM236Q5W0B7 351 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 WDR25Q64LD2 544 aaPredicted RBP14.06□□□□□ -0.16
CLK3-210ENST00000563112 SFRP4Q6FHJ7 346 aaPredicted RBP14.06□□□□□ -0.16
CLK3-210ENST00000563112 PRSS45Q7RTY3 260 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 GCDHQ92947 438 aaPredicted RBP14.06□□□□□ -0.16
CLK3-210ENST00000563112 NUDT16L1Q9BRJ7 211 aaKnown RBP14.06□□□□□ -0.16
CLK3-210ENST00000563112 MS4A7Q9GZW8 240 aaPredicted RBP14.06□□□□□ -0.16
CLK3-210ENST00000563112 NIPAL2Q9H841 368 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 TVP23BQ9NYZ1 205 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 ZNF69Q9UC07 566 aa14.06□□□□□ -0.16
CLK3-210ENST00000563112 NBEAL1Q6ZS30 2694 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 hCG_38984A0A1B0GV85 526 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 OOEPA6NGQ2 149 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 C3orf80F5H4A9 247 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 TIPRLO75663 272 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 ATP5HO75947 161 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 PSMB10P40306 273 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 NAA10P41227 235 aaPredicted RBP14.05□□□□□ -0.16
CLK3-210ENST00000563112 GSK3AP49840 483 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 PAX2Q02962 417 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 APOFQ13790 326 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 KLF17Q5JT82 389 aaPredicted RBP14.05□□□□□ -0.16
CLK3-210ENST00000563112 LCN1P1Q5VSP4 162 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 CD276Q5ZPR3 534 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 ZNF826PQ6ZT77 177 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 KRT77Q7Z794 578 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 OR5K1Q8NHB7 308 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 TECTBQ96PL2 329 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 PRRG3Q9BZD7 231 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 LAMP5Q9UJQ1 280 aa14.05□□□□□ -0.16
CLK3-210ENST00000563112 ANXA2P2A6NMY6 339 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 ADAM20O43506 726 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 ENSAO43768 121 aaKnown RBP14.04□□□□□ -0.16
CLK3-210ENST00000563112 IL5RAQ01344 420 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 FAHD1Q6P587 224 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 KCTD18Q6PI47 426 aaPredicted RBP14.04□□□□□ -0.16
CLK3-210ENST00000563112 PARP8Q8N3A8 854 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 SIGLECL1Q8N7X8 197 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 ZDHHC22Q8N966 263 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 BBS1Q8NFJ9 593 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 UTP4Q969X6 686 aaKnown RBP14.04□□□□□ -0.16
CLK3-210ENST00000563112 UPRTQ96BW1 309 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 MICU1Q9BPX6 476 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 PAPOLGQ9BWT3 736 aaKnown RBP14.04□□□□□ -0.16
CLK3-210ENST00000563112 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 RNPEPL1Q9HAU8 725 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 ZNF391Q9UJN7 358 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 MPC1Q9Y5U8 109 aa14.04□□□□□ -0.16
CLK3-210ENST00000563112 ALOX5APP20292 161 aa14.03□□□□□ -0.16
CLK3-210ENST00000563112 SLC2A5P22732 501 aa14.03□□□□□ -0.16
CLK3-210ENST00000563112 MTNR1AP48039 350 aa14.03□□□□□ -0.16
CLK3-210ENST00000563112 PSMA6P60900 246 aaKnown RBP14.03□□□□□ -0.16
CLK3-210ENST00000563112 ESRRGP62508 458 aa14.03□□□□□ -0.16
CLK3-210ENST00000563112 ZNF841Q6ZN19 808 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms