RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 RNF166Q96A37 237 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-207ENST00000563109 DIRC2Q96SL1 478 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 SLC22A4Q9H015 551 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 RAB1BQ9H0U4 201 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 PLEKHA1Q9HB21 404 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 BEX4Q9NWD9 120 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-207ENST00000563109 MRPL15Q9P015 296 aaKnown RBP16.07■□□□□ 0.16
RAB40C-207ENST00000563109 CELSR2Q9HCU4 2923 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 UNC79Q9P2D8 2635 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 LOC390937A0A1W2PQ73 354 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 OR4C45A6NMZ5 311 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 C17orf100A8MU93 164 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 OVOL3O00110 214 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 ISG15P05161 165 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 ACHEP22303 614 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 CCL1P22362 96 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 TNFSF4P23510 183 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 GNALP38405 381 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 GTF2A1P52655 376 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-207ENST00000563109 BDH1Q02338 343 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF773Q6PK81 442 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF485Q8NCK3 441 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 SEMA6DQ8NFY4 1073 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 OR13G1Q8NGZ3 307 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 SMIM19Q96E16 107 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 TPK1Q9H3S4 243 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 MSL2Q9HCI7 577 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 TMEM100Q9NV29 134 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 ZDHHC8Q9ULC8 765 aa16.06■□□□□ 0.16
RAB40C-207ENST00000563109 LSM2Q9Y333 95 aaKnown RBP16.06■□□□□ 0.16
RAB40C-207ENST00000563109 ZSCAN5BA6NJL1 495 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 SPRY3O43610 288 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 MAP2K4P45985 399 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 CDH15P55291 814 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 RIPPLY1Q0D2K3 151 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 PCGF3Q3KNV8 242 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 XAF1Q6GPH4 301 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF367Q7RTV3 350 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 PLPP7Q8NBV4 271 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 GTF3AQ92664 365 aaKnown RBP16.05■□□□□ 0.16
RAB40C-207ENST00000563109 MBD6Q96DN6 1003 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 OR5M11Q96RB7 305 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 SLC30A2Q9BRI3 323 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 PAPOLGQ9BWT3 736 aaKnown RBP16.05■□□□□ 0.16
RAB40C-207ENST00000563109 ASH1LQ9NR48 2969 aaKnown RBP16.05■□□□□ 0.16
RAB40C-207ENST00000563109 HHLA2Q9UM44 414 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 FBN2P35556 2912 aa16.05■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF816-ZNF321PA0A0X1KG74 233 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 A0A1B0GTI1 187 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 DHRS7CA6NNS2 312 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 OGG1O15527 345 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 TPD52L2O43399 206 aaKnown RBP16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ZFPL1O95159 310 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 LALBAP00709 142 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ACKR3P25106 362 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 SLC3A1Q07837 685 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ACSM1Q08AH1 577 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 OR8G1Q15617 311 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 DEFB113Q30KQ7 82 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ZBTB37Q5TC79 503 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 RDH10Q8IZV5 341 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ZFP41Q8N8Y5 198 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 OR2Z1Q8NG97 314 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 FCGR1BQ92637 280 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ELMOD3Q96FG2 381 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 PDCD1LG2Q9BQ51 273 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 SOX7Q9BT81 388 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ADAT1Q9BUB4 502 aaKnown RBP16.04■□□□□ 0.16
RAB40C-207ENST00000563109 EGLN1Q9GZT9 426 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 BARX1Q9HBU1 254 aaPredicted RBP16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ABCB9Q9NP78 766 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ACOT13Q9NPJ3 140 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF701Q9NV72 531 aaPredicted RBP16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ENPP5Q9UJA9 477 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 PIGLQ9Y2B2 252 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 V9GYS6 101 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 ARFGEF3Q5TH69 2177 aa16.04■□□□□ 0.16
RAB40C-207ENST00000563109 CENPEQ02224 2701 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 PNMA8CA0A1B0GUJ8 204 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 H3BSH0 61 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 LILRA1O75019 489 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 IGHV1-46P01743 117 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 HSMCR30P0CW71 290 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 CA6P23280 308 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 PTH2RP49190 550 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 ATP5J2P56134 94 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 TSTQ16762 297 aaKnown RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 FAM209AQ5JX71 171 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 DMKNQ6E0U4 476 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 Q6ZR03 302 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 SPARTQ8N0X7 666 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 ZCCHC24Q8N2G6 241 aaKnown RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 OR13C3Q8NGS6 347 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 OR14K1Q8NGZ2 314 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 RPS4Y2Q8TD47 263 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 TSEN15Q8WW01 171 aaKnown RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 NEU4Q8WWR8 484 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 UFD1Q92890 307 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 PERPQ96FX8 193 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms