RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 A0A1W2PRX2 142 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 OR6C6A6NF89 314 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 BBIP1A8MTZ0 92 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 E7EQ34 232 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 EDIL3O43854 480 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 MAS1P04201 325 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 WNT1P04628 370 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 RPS12P25398 132 aaKnown RBP8.37□□□□□ -1.07
CDH1-205ENST00000562836 IMPA1P29218 277 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 BACE1P56817 501 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 IRF9Q00978 393 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 IL10RBQ08334 325 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 ALG10BQ5I7T1 473 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 LHX8Q68G74 356 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 FCRL6Q6DN72 434 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 SIGLEC15Q6ZMC9 328 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 GLDNQ6ZMI3 551 aaPredicted RBP8.37□□□□□ -1.07
CDH1-205ENST00000562836 DET1Q7L5Y6 550 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 YAF2Q8IY57 180 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 KLHDC8AQ8IYD2 350 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 DTWD1Q8N5C7 304 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 CXorf40BQ96DE9 158 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 KCTD7Q96MP8 289 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 SPATA33Q96N06 139 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 PLAC1Q9HBJ0 212 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 OR51B2Q9Y5P1 312 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 E9PQ18 207 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 MAN2B1O00754 1011 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 TNFSF12O43508 249 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 CLDN1O95832 211 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 MPC1LP0DKB6 136 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 RPL7AP62424 266 aaKnown RBP8.36□□□□□ -1.07
CDH1-205ENST00000562836 DUSP5Q16690 384 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 Q6ZNB5 142 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 B3GNT7Q8NFL0 401 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 OR6N2Q8NGY6 317 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 MARCH1Q8TCQ1 289 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 CYB5D2Q8WUJ1 264 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 TMED6Q8WW62 240 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 DYNLL2Q96FJ2 89 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 B3GALT1Q9Y5Z6 326 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 COL4A1P02462 1669 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 MANSC4A6NHS7 340 aaPredicted RBP8.36□□□□□ -1.07
CDH1-205ENST00000562836 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 HCRTO43612 131 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 CD74P04233 296 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 GNB3P16520 340 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 HTR1EP28566 365 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 RBMS1P29558 406 aaKnown RBP8.36□□□□□ -1.07
CDH1-205ENST00000562836 UBE2MP61081 183 aaKnown RBP8.36□□□□□ -1.07
CDH1-205ENST00000562836 ADAM8P78325 824 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 OR7A5Q15622 319 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 CCL15Q16663 113 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 TMEM183BQ1AE95 376 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 NRN1LQ496H8 165 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 PRAMEF17Q5VTA0 474 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 MON1BQ7L1V2 547 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
CDH1-205ENST00000562836 GKN2Q86XP6 184 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 OR52I1Q8NGK6 324 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 OR52I2Q8NH67 350 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 SLC17A5Q9NRA2 495 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 LYRM2Q9NU23 88 aaPredicted RBP8.36□□□□□ -1.07
CDH1-205ENST00000562836 FBLN5Q9UBX5 448 aa8.36□□□□□ -1.07
CDH1-205ENST00000562836 UMAD1C9J7I0 102 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 GABRPO00591 440 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 XKRYO14609 159 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 XRCC3O43542 346 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 TRUB2O95900 331 aaKnown RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 OR1D2P34982 312 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 ENDOGQ14249 297 aaKnown RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 ITPRIPL2Q3MIP1 535 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 DCST2Q5T1A1 773 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 FAM71E1Q6IPT2 247 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 Q6ZN92 141 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 WDR53Q7Z5U6 358 aaPredicted RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 CMC1Q7Z7K0 106 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 LGI3Q8N145 548 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 CHST4Q8NCG5 386 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 ACVR1CQ8NER5 493 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 REPS2Q8NFH8 660 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 Q9N2K0 584 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 LOC100509620A0A075B734 347 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 LOC285095A0A1B0GVY8 99 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 PRICKLE3O43900 615 aaPredicted RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 CLDN11O75508 207 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 ARL2P36404 184 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 PPOXP50336 477 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 SRPXP78539 464 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 ATXN7L3Q14CW9 347 aaPredicted RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 ATP6AP1LQ52LC2 224 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 GRHL2Q6ISB3 625 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 TNFAIP8L2Q6P589 184 aaPredicted RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 TSEN54Q7Z6J9 526 aaKnown RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 RAB39BQ96DA2 213 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 NDFIP1Q9BT67 221 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms