RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NUFIP2Q7Z417 695 aaKnown RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 OR4C5Q8NGB2 326 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 OR6C68A6NDL8 312 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 NPIPB13A6NJU9 1138 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 NPIPB4C9JG80 1138 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PLPP2O43688 288 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SLC34A2O95436 690 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 LIMS3P0CW19 117 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 LIMS4P0CW20 117 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PPP3CBP16298 524 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SNRPEP62304 92 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 NHLH2Q02577 135 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PDZK1IP1Q13113 114 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 GUK1Q16774 197 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ZNF770Q6IQ21 691 aaPredicted RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 MRPL14Q6P1L8 145 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 GFRALQ6UXV0 394 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 CPEB3Q8NE35 698 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 IL17RDQ8NFM7 739 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ROBO4Q8WZ75 1007 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PRSS27Q9BQR3 290 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ZNF286AQ9HBT8 521 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 RNF24Q9Y225 148 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ARHGEF17Q96PE2 2063 aaPredicted RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 LOC102723996A0A087X1L8 192 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 CYCSP99999 105 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 INSM1Q01101 510 aaPredicted RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 OR1F12Q8NHA8 337 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 DYNC2LI1Q8TCX1 351 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SPIN2AQ99865 258 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SPIN2BQ9BPZ2 258 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PBOV1Q9GZY1 135 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ADGRL4Q9HBW9 690 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 CACNA1CQ13936 2221 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 IGHA1P01876 353 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 ZNF273Q14593 569 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 LHFPL2Q6ZUX7 228 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 KISS1RQ969F8 398 aaPredicted RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 ARL11Q969Q4 196 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 C4orf45Q96LM5 186 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SLC5A7Q9GZV3 580 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 AICDAQ9GZX7 198 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SYNPO2LQ9H987 977 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 UNKLQ9H9P5 680 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 A0A1B0GV72 72 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ZC3H12DA2A288 527 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 NPIPB9F8W1W9 429 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 DXOO77932 396 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 PRF1P14222 555 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SNRPBP14678 240 aaKnown RBP6.74□□□□□ -1.33
TCF4-216ENST00000562680 ECI1P42126 302 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 GABRA4P48169 554 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ASAH1Q13510 395 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 NKPD1Q17RQ9 610 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ZNF674Q2M3X9 581 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PPP1R32Q7Z5V6 425 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 CMTM1Q8IZ96 169 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 TMEM185AQ8NFB2 350 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ZNF596Q8TC21 504 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PSMF1Q92530 271 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SPSB1Q96BD6 273 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 EGLN1Q9GZT9 426 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 ARL6Q9H0F7 186 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SLCO1C1Q9NYB5 712 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 PIGLQ9Y2B2 252 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SLCO1B1Q9Y6L6 691 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 SPTA1P02549 2419 aa6.74□□□□□ -1.33
TCF4-216ENST00000562680 MCRIP1C9JLW8 97 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 GFRA3O60609 400 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 NDUFS6O75380 124 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 HLA-DMAP28067 261 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 AGTR1P30556 359 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 CDKN2AP42771 156 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 TMEM65Q6PI78 240 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 TCTE3Q8IZS6 198 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 RBM38Q9H0Z9 239 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 RPS10P5Q9NQ39 176 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 GPR84Q9NQS5 396 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 GAR1Q9NY12 217 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 SLC5A6Q9Y289 635 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 TRBV23-1A0A0A0MS06 115 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 A0A1W2PQ09 198 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 RFPL4AA6NLU0 287 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF729A6NN14 1252 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 RFPL4AL1F8VTS6 287 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 PPP1R2P9O14990 202 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 AKR7A2O43488 359 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF44P15621 663 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ALOX5APP20292 161 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 PTTG1IPP53801 180 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 FAM83FQ8NEG4 500 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 MCHR2Q969V1 340 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 BOD1Q96IK1 185 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 CMSS1Q9BQ75 279 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 TSPAN10Q9H1Z9 355 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 SIRT7Q9NRC8 400 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 NLKQ9UBE8 527 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms