RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PDZD2O15018 2839 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 SPTBN1Q01082 2364 aaKnown RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 UNC79Q9P2D8 2635 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 PRR14LQ5THK1 2151 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ALPK2Q86TB3 2170 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ARPC4-TTLL3A0A0A6YYG9 625 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 IGLV1-36A0A0B4J1U3 117 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 OR6C65A6NJZ3 312 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 OR5H1A6NKK0 313 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 DCTN6O00399 190 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 DLGAP1O14490 977 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 MITFO75030 526 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 CIB2O75838 187 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 LYZL6O75951 148 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 OR6A2O95222 327 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 STAMBPO95630 424 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 IGHV4-39P01824 125 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 PATE4P0C8F1 98 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 SAGP10523 405 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 CRYGSP22914 178 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 AHCYP23526 432 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 FASP25445 335 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 GTF2E2P29084 291 aaKnown RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 EPHA2P29317 976 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 CDH15P55291 814 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 PRPS1P60891 318 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 RPL27P61353 136 aaKnown RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 ERVK-25P63136 954 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ARF1P84077 181 aaKnown RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 CDK5Q00535 292 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 FMODQ06828 376 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 C1DQ13901 141 aaKnown RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 TAB1Q15750 504 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 CEACAM16Q2WEN9 425 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 KDM4DQ6B0I6 523 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 DPY19L2P2Q6ZN68 376 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 RRM2BQ7LG56 351 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 BHLHA15Q7RTS1 189 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 ZNF100Q8IYN0 542 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 CDK20Q8IZL9 346 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 PARP8Q8N3A8 854 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ARIH2OSQ8N7S6 290 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 POMGNT2Q8NAT1 580 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ADAD2Q8NCV1 583 aaKnown RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 NOXO1Q8NFA2 376 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 OR5K1Q8NHB7 308 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 FGFBP3Q8TAT2 258 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 MAGEE2Q8TD90 523 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 GIPC3Q8TF64 312 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 PIGTQ969N2 578 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 MCHR2Q969V1 340 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 RASD2Q96D21 266 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 CENPNQ96H22 339 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 ST6GAL2Q96JF0 529 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 SAMD8Q96LT4 415 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 DACH2Q96NX9 599 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 RAB3IPQ96QF0 476 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 SLC29A1Q99808 456 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 FAM110AQ9BQ89 295 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ALG12Q9BV10 488 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 OSBPL10Q9BXB5 764 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 NMNAT2Q9BZQ4 307 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 ACTR6Q9GZN1 396 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 SEMA6AQ9H2E6 1030 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 YY1AP1Q9H869 796 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 CRLF2Q9HC73 371 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 SLC17A5Q9NRA2 495 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 B3GNT2Q9NY97 397 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 TAS2R16Q9NYV7 291 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 GLTPQ9NZD2 209 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 NPAP1Q9NZP6 1156 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 PDP1Q9P0J1 537 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 CRNNQ9UBG3 495 aaPredicted RBP3.88□□□□□ -1.79
SMG1-206ENST00000562668 KCNN3Q9UGI6 736 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 TMCC3Q9ULS5 477 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 SLC25A15Q9Y619 301 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 CELSR2Q9HCU4 2923 aa3.88□□□□□ -1.79
SMG1-206ENST00000562668 VPS13CQ709C8 3753 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 A0A1W2PR80 420 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 A0A1W2PRG6 482 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 PRSS37A4D1T9 235 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 DPRXA6NFQ7 191 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ZNF726A6NNF4 738 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ZNF99A8MXY4 864 aaPredicted RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 H7C1C5 153 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 M0R3G1 203 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 AHCYL1O43865 530 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 MGRN1O60291 552 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 CTAG2O75638 210 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 RAD51DO75771 328 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SOX14O95416 240 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SLC2A10O95528 541 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 BCL10O95999 233 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 IGKV3-15P01624 115 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 IGLV1-44P01699 117 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms