RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 RNF7Q9UBF6 113 aa7.92□□□□□ -1.14
NSMCE1-203ENST00000562039 OR5V1Q9UGF6 321 aa7.92□□□□□ -1.14
NSMCE1-203ENST00000562039 GTF2A1LQ9UNN4 478 aa7.92□□□□□ -1.14
NSMCE1-203ENST00000562039 COPS3Q9UNS2 423 aa7.92□□□□□ -1.14
NSMCE1-203ENST00000562039 RHBDD3Q9Y3P4 386 aa7.92□□□□□ -1.14
NSMCE1-203ENST00000562039 AUP1Q9Y679 476 aa7.92□□□□□ -1.14
NSMCE1-203ENST00000562039 hCG_38984A0A1B0GV85 526 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 A0A1B0GW55 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ZNF850A8MQ14 1090 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 G3V2T6 193 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 J3QLI3 93 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 XRCC2O43543 280 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 CIB2O75838 187 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 APOL3O95236 402 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L2P0CJ85 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L3P0CJ86 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L4P0CJ87 422 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L5P0CJ88 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L6P0CJ89 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L7P0CJ90 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 IGHV4-38-2P0DP08 117 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ZNF12P17014 697 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 SLC2A5P22732 501 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 POLR2IP36954 125 aaKnown RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 PITPNBP48739 271 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 GK3PQ14409 553 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ATP6AP1Q15904 470 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ZNF404Q494X3 552 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ARMCX4Q5H9R4 360 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 KLF17Q5JT82 389 aaPredicted RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4L9Q6RFH8 374 aaPredicted RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 KCTD8Q6ZWB6 473 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 PRSS45Q7RTY3 260 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 COMMD2Q86X83 199 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 C1orf87Q8N0U7 546 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 MUC20Q8N307 709 aaPredicted RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 SIGLECL1Q8N7X8 197 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 TCEANCQ8N8B7 351 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 OR8B12Q8NGG6 310 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 OR8B3Q8NGG8 313 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ZNF418Q8TF45 676 aaPredicted RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 PYDC1Q8WXC3 89 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 PIGCQ92535 297 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 NEIL1Q96FI4 390 aaPredicted RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 LYZL4Q96KX0 146 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 TECTBQ96PL2 329 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 OR8B2Q96RD0 313 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 TBX5Q99593 518 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 MRI1Q9BV20 369 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 PAPOLGQ9BWT3 736 aaKnown RBP7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 RIBC2Q9H4K1 309 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 CTSZQ9UBR2 303 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 DUX4Q9UBX2 424 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 ZNF69Q9UC07 566 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 LAMP5Q9UJQ1 280 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 IKZF2Q9UKS7 526 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 LRP12Q9Y561 859 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 AP4S1Q9Y587 144 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 INSIG2Q9Y5U4 225 aa7.91□□□□□ -1.14
NSMCE1-203ENST00000562039 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 MDFIC2A0A1B0GVS7 189 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 IFNL4K9M1U5 179 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 HAX1O00165 279 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 PRODHO43272 600 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 ADAM20O43506 726 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 GMDSO60547 372 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 ACKR3P25106 362 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 FASP25445 335 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 THBS2P35442 1172 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 GNALP38405 381 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 GATA4P43694 442 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 RASSF2P50749 326 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 ACTG1P63261 375 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 PRB3Q04118 309 aaPredicted RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 MFGE8Q08431 387 aaPredicted RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 WDR25Q64LD2 544 aaPredicted RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 GCSAMQ8N6F7 178 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 SEMA6DQ8NFY4 1073 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 OR5T2Q8NGG2 359 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 LRRC29Q8WV35 223 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 RPL3LQ92901 407 aaKnown RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 SPSB4Q96A44 273 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 FAM71F1Q96KD3 344 aaPredicted RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 TEAD3Q99594 435 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 APOL4Q9BPW4 351 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 TEX12Q9BXU0 123 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 FGF23Q9GZV9 251 aaPredicted RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 TOR3AQ9H497 397 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 ESM1Q9NQ30 184 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 TNFRSF19Q9NS68 423 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 SNTG1Q9NSN8 517 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 MRPL15Q9P015 296 aaKnown RBP7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 CLN8Q9UBY8 286 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 MIOXQ9UGB7 285 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 LRCH1Q9Y2L9 728 aa7.9□□□□□ -1.14
NSMCE1-203ENST00000562039 TRAV40A0A0B4J280 105 aa7.89□□□□□ -1.15
NSMCE1-203ENST00000562039 IGHV2-70DA0A0C4DH43 119 aa7.89□□□□□ -1.15
NSMCE1-203ENST00000562039 A0A1B0GWJ7 208 aa7.89□□□□□ -1.15
NSMCE1-203ENST00000562039 OOEPA6NGQ2 149 aa7.89□□□□□ -1.15
NSMCE1-203ENST00000562039 A6NIN4 97 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms