RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LIPEQ05469 1076 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 DMRTC1Q5HYR2 192 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 GPR139Q6DWJ6 353 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ADCK1Q86TW2 530 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 C11orf53Q8IXP5 236 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 RNF113BQ8IZP6 322 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 OR8S1Q8NH09 359 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ERGIC1Q969X5 290 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 PHF21AQ96BD5 680 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ATP6V1G3Q96LB4 118 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 SSX3Q99909 188 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 IFT27Q9BW83 186 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 DNAJC27Q9NZQ0 273 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 CYB5R1Q9UHQ9 305 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ATPIF1Q9UII2 106 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ZNF391Q9UJN7 358 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 KPTNQ9Y664 436 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 A0A1W2PQ09 198 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 MEX3AA1L020 520 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 MEGF11A6BM72 1044 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 NME4O00746 187 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 BHLHE40O14503 412 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 GPR37O15354 613 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 ANGPTL7O43827 346 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 AHCYL1O43865 530 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 GMDSO60547 372 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 EDF1O60869 148 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 RENP00797 406 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 LHBP01229 141 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 GYPBP06028 91 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 NDUFB7P17568 137 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 EEF1B2P24534 225 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 POU1F1P28069 291 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 CRABP1P29762 137 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 LOXL3P58215 753 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 TMEM95Q3KNT9 176 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 DPY19L2P2Q6ZN68 376 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 DPY19L4Q7Z388 723 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 OR9Q1Q8NGQ5 310 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 TSPEARQ8WU66 669 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 RPL3LQ92901 407 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 FAM162AQ96A26 154 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 R3HDM4Q96D70 268 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 CLPTM1LQ96KA5 538 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 COPS4Q9BT78 406 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 NDEL1Q9GZM8 345 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 BRD7Q9NPI1 651 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 CENPMQ9NSP4 180 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 TMEM5Q9Y2B1 443 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 ENPP4Q9Y6X5 453 aa9.53□□□□□ -0.88
NSMCE1-202ENST00000561960 CDIPTO14735 213 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 AKR7A2O43488 359 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 NDUFB3O43676 98 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 SPARCP09486 303 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 IGLL1P15814 213 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 NOS3P29474 1203 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 RAB13P51153 203 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC7A2P52569 658 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 MICBQ29980 383 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 FOXB2Q5VYV0 432 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 TEX36Q5VZQ5 186 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 CGB2Q6NT52 195 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 CBLL1Q75N03 491 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 DCXRQ7Z4W1 244 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 CYP4Z1Q86W10 505 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 CMTM4Q8IZR5 234 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 BATF2Q8N1L9 274 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 FAM156AQ8NDB6 213 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 TNFRSF14Q92956 283 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 GPX7Q96SL4 187 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 OR52D1Q9H346 318 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 EGLN3Q9H6Z9 239 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 SAR1AQ9NR31 198 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 TAS2R1Q9NYW7 299 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 FBLN5Q9UBX5 448 aa9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 PRPF19Q9UMS4 504 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-202ENST00000561960 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 PTBP3O95758 552 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 TXNDC12O95881 172 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 ECDO95905 644 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 ANXA2P07355 339 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 JUNBP17275 347 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 COX7A1P24310 79 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 GSK3BP49841 420 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 TAF13Q15543 124 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 DGUOKQ16854 277 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 HCP5Q6MZN7 132 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 KCTD8Q6ZWB6 473 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC15A3Q8IY34 581 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 FAM185AQ8N0U4 392 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 PROKR2Q8NFJ6 384 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 OR1M1Q8NGA1 313 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 OR51G2Q8NGK0 314 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 OR2T6Q8NHC8 308 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms